HHsearch alignment for GI: 254781166 and conserved domain: PRK13940

Probab=96.17  E-value=0.06  Score=32.56  Aligned_cols=74  Identities=12%  Similarity=0.141  Sum_probs=49.3

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf             2997899948898841799999999988988-999848988999999997138928999888999999999999999984
Q gi|254781166|r    8 MKDKRGIVLGVANNRSLAWSIAKMCHAAGAK-VALTWQGDATKKRIEGLVEGMDFFMAGHCNVSNSETIDDVFRNLEKEW   86 (284)
Q Consensus         8 L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~-Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (284)
T Consensus       179 l~~~~vlvvGaGe---m~~l~~k~L~~~g~~~i~v~nRt~~ra~~la~~~---~~~-----~~~~~~~-------l~~~l  240 (414)
T PRK13940        179 ISSKNVLIIGAGQ---TGELLFRHVTALAPKQIMLANRTIEKAQKITSAF---RNA-----SAHYLSE-------LPQLI  240 (414)
T ss_pred             CCCCEEEEECCCH---HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH---CCC-----CCCCHHH-------HHHHH
T ss_conf             1228389966864---7899999999769987999457567799999970---888-----5016999-------99998


Q ss_pred             CCCCEEEECCCCC
Q ss_conf             7988999627212
Q gi|254781166|r   87 GTIDFLVHAIAFS   99 (284)
Q Consensus        87 G~iD~lInnag~~   99 (284)
T Consensus       241 ~~aDivisaT~a~  253 (414)
T PRK13940        241 KKADIIIAAVNVL  253 (414)
T ss_pred             HHCCEEEEECCCC
T ss_conf             6388799816982