HHsearch alignment for GI: 254781166 and conserved domain: TIGR01830
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase; InterPro: IPR011284 This entry represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis found in many plant and bacterial species. This enzyme is involved in type II fatty acid biosynthesis, where the individual metabolic transformations are carried out by different enzymes rather than by a single enzyme as occurs in type I fatty acid biosynthesis . Structural studies show that the enzyme is a tetramer which forms a typical Rossman fold , . Unlike other members of the short-chain dehydrogenase/reductase superfamily, the enzyme undergoes a marked conformational change upon binding of the NADP(H)cofactor. This conformational change aligns the side chains of the catalytic triad at the active site in an active conformation and increases the affinity of the enzyme for its substrate.; GO: 0004316 3-oxoacyl-[acyl-carrier-protein] reductase activity, 0051287 NAD binding, 0006633 fatty acid biosynthetic process.
Probab=100.00 E-value=0 Score=533.14 Aligned_cols=233 Identities=24% Similarity=0.291 Sum_probs=214.1
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 999488988417999999999889889998489-8899999999713-89289998889999999999999999847988
Q gi|254781166|r 13 GIVLGVANNRSLAWSIAKMCHAAGAKVALTWQG-DATKKRIEGLVEG-MDFFMAGHCNVSNSETIDDVFRNLEKEWGTID 90 (284)
Q Consensus 13 ~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~-~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 90 (284)
T Consensus 1 AlVTGa--sRGIG~AIA~~LA~~Ga~V~i~y~~~e~~~~~~~~e~~~~G~~a~~~~~dvs~~~~~~~~~~~~~~~~G-iD 77 (238)
T TIGR01830 1 ALVTGA--SRGIGRAIALKLAKEGAKVIITYRTSEEGAEEVVEEIKELGVKAAGVVLDVSDREDVKALVEEAEEELG-ID 77 (238)
T ss_pred CEECCC--CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-CE
T ss_conf 967167--861679999999867995999659825788899999985697599996038888999999999999829-90
Q ss_pred EEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH--CCCCCEECCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 999627212742125862135899985564026402322346788741--012210001333234677201244544899
Q gi|254781166|r 91 FLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLM--NKGGSMLTLTYLGADKVMPHYNCMGPAKAA 168 (284)
Q Consensus 91 ~lInnag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m--~~~G~IInisS~~~~~~~p~~~~Y~asKaa 168 (284)
T Consensus 78 iLVNNAGITrD~----Ll~RMk~edWd~Vi~~NL~g~F~~t~~v~~~M~K~R~GrIINisSVVG~~GN~GQaNYaASKAG 153 (238)
T TIGR01830 78 ILVNNAGITRDN----LLMRMKEEDWDAVINVNLKGVFNLTQAVLRPMIKQRSGRIINISSVVGLMGNAGQANYAASKAG 153 (238)
T ss_pred EEEECCCCCCCC----HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCHHHHHHHHHH
T ss_conf 899787413430----1004885568999986126687888998898875067434861002000068742678888755
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCE
Q ss_conf 99999999998277423799852238726945631899389999998268899876699999999986098878868868
Q gi|254781166|r 169 LQSAVRYLAMDLGRQSGIRVNALSAGPAKTLASSGISDFRYILKWNEYNSPLGRNITHDEVAKSALYLLSDFSSGVTGEC 248 (284)
Q Consensus 169 i~~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~plgR~g~peeiA~av~fL~Sd~s~~iTG~~ 248 (284)
T Consensus 154 ~IGftKSlAkElasR-nItVNaVAPGFI~TdMT~~L~e--~~~~~~l~~IPLgR~G~pEeVA~~v~FLASd~AsYITGqv 230 (238)
T TIGR01830 154 VIGFTKSLAKELASR-NITVNAVAPGFIETDMTDKLSE--KVKKAMLSQIPLGRFGTPEEVANAVAFLASDEASYITGQV 230 (238)
T ss_pred HHHHHHHHHHHCCCC-CCEEEEECCCCCCCCCCHHCCH--HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCE
T ss_conf 899999999860368-7058887489989700021698--8999998527723267765699999973251247425516
Q ss_pred EEECCCC
Q ss_conf 9975986
Q gi|254781166|r 249 HYVDAGY 255 (284)
Q Consensus 249 i~vDGG~ 255 (284)
T Consensus 231 ~~VdGGm 237 (238)
T TIGR01830 231 IHVDGGM 237 (238)
T ss_pred EECCCCC
T ss_conf 6306878