HHsearch alignment for GI: 254781166 and conserved domain: TIGR01832
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase; InterPro: IPR011286 This entry describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (IPR002198 from INTERPRO). This protein has been characterised in Erwinia chrysanthemi as an enzyme of pectin degradation .; GO: 0008678 2-deoxy-D-gluconate 3-dehydrogenase activity, 0051287 NAD binding.
Probab=100.00 E-value=0 Score=389.72 Aligned_cols=241 Identities=21% Similarity=0.242 Sum_probs=218.2
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf 29978999488988417999999999889889998489889999999971389289998889999999999999999847
Q gi|254781166|r 8 MKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMDFFMAGHCNVSNSETIDDVFRNLEKEWG 87 (284)
Q Consensus 8 L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 87 (284)
T Consensus 3 L~GK~alvTGa~t--GlGQG~a~gLA~AGadi~g~~~~~~~~ET~~~v~~~Gr~f~~~~~Dl~~~~~~~~~~~~~~~~~g 80 (249)
T TIGR01832 3 LEGKVALVTGANT--GLGQGIAVGLAEAGADIVGVGHISEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFG 80 (249)
T ss_pred CCCCEEEEECCCC--CHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCEEHHHHHHHCHHHHHHHHHHHHHHHC
T ss_conf 7877688825988--73689999998577417851431263888999998252100021212232137899999998618
Q ss_pred CCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH-CC--CCCEECCCCCCCCCCCCCHHHHHH
Q ss_conf 988999627212742125862135899985564026402322346788741-01--221000133323467720124454
Q gi|254781166|r 88 TIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLM-NK--GGSMLTLTYLGADKVMPHYNCMGP 164 (284)
Q Consensus 88 ~iD~lInnag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m-~~--~G~IInisS~~~~~~~p~~~~Y~a 164 (284)
T Consensus 81 ~~DiLVNNAGIIrR~----da~~f~e~dWd~V~nvNlk~vF~l~q~~a~~~l~~G~~GkiiNIAS~LSFQGGirVPsYTA 156 (249)
T TIGR01832 81 KIDILVNNAGIIRRE----DAVEFSEKDWDDVMNVNLKSVFFLTQAAAKQFLKQGRGGKIINIASLLSFQGGIRVPSYTA 156 (249)
T ss_pred CCCEEEECCCHHHHH----HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCCCCHHHHH
T ss_conf 865676074221045----7751561445799986689999999999999996489950575142344226755124666
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCCC
Q ss_conf 48999999999999827742379985223872694563189938999999826889987669999999998609887886
Q gi|254781166|r 165 AKAALQSAVRYLAMDLGRQSGIRVNALSAGPAKTLASSGISDFRYILKWNEYNSPLGRNITHDEVAKSALYLLSDFSSGV 244 (284)
Q Consensus 165 sKaai~~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~plgR~g~peeiA~av~fL~Sd~s~~i 244 (284)
T Consensus 157 SK~~v~GlTk~lAnEWa~~-ginVNAIAPGY~~T~NT~~lRaD~~Rn~~Il~RIPaGrWG~p~D~~G~aVFLaS~ASdYv 235 (249)
T TIGR01832 157 SKHGVAGLTKLLANEWAAK-GINVNAIAPGYMETNNTQALRADEDRNAAILERIPAGRWGTPEDLGGAAVFLASSASDYV 235 (249)
T ss_pred HHHHHHHHHHHHHHHHHHC-CCCEEEECCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 6777777899999899873-881531158876645515420317778999731789998484000306888877554343
Q ss_pred CCCEEEECCCC
Q ss_conf 88689975986
Q gi|254781166|r 245 TGECHYVDAGY 255 (284)
Q Consensus 245 TG~~i~vDGG~ 255 (284)
T Consensus 236 ~G~~l~VDGGW 246 (249)
T TIGR01832 236 NGAILAVDGGW 246 (249)
T ss_pred CCEEEEECCCC
T ss_conf 65066207731