HHsearch alignment for GI: 254781166 and conserved domain: TIGR01832

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase; InterPro: IPR011286 This entry describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (IPR002198 from INTERPRO). This protein has been characterised in Erwinia chrysanthemi as an enzyme of pectin degradation .; GO: 0008678 2-deoxy-D-gluconate 3-dehydrogenase activity, 0051287 NAD binding.
Probab=100.00  E-value=0  Score=389.72  Aligned_cols=241  Identities=21%  Similarity=0.242  Sum_probs=218.2

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf             29978999488988417999999999889889998489889999999971389289998889999999999999999847
Q gi|254781166|r    8 MKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMDFFMAGHCNVSNSETIDDVFRNLEKEWG   87 (284)
Q Consensus         8 L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   87 (284)
T Consensus         3 L~GK~alvTGa~t--GlGQG~a~gLA~AGadi~g~~~~~~~~ET~~~v~~~Gr~f~~~~~Dl~~~~~~~~~~~~~~~~~g   80 (249)
T TIGR01832         3 LEGKVALVTGANT--GLGQGIAVGLAEAGADIVGVGHISEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFG   80 (249)
T ss_pred             CCCCEEEEECCCC--CHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCEEHHHHHHHCHHHHHHHHHHHHHHHC
T ss_conf             7877688825988--73689999998577417851431263888999998252100021212232137899999998618


Q ss_pred             CCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH-CC--CCCEECCCCCCCCCCCCCHHHHHH
Q ss_conf             988999627212742125862135899985564026402322346788741-01--221000133323467720124454
Q gi|254781166|r   88 TIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLM-NK--GGSMLTLTYLGADKVMPHYNCMGP  164 (284)
Q Consensus        88 ~iD~lInnag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m-~~--~G~IInisS~~~~~~~p~~~~Y~a  164 (284)
T Consensus        81 ~~DiLVNNAGIIrR~----da~~f~e~dWd~V~nvNlk~vF~l~q~~a~~~l~~G~~GkiiNIAS~LSFQGGirVPsYTA  156 (249)
T TIGR01832        81 KIDILVNNAGIIRRE----DAVEFSEKDWDDVMNVNLKSVFFLTQAAAKQFLKQGRGGKIINIASLLSFQGGIRVPSYTA  156 (249)
T ss_pred             CCCEEEECCCHHHHH----HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCCCCHHHHH
T ss_conf             865676074221045----7751561445799986689999999999999996489950575142344226755124666


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCCC
Q ss_conf             48999999999999827742379985223872694563189938999999826889987669999999998609887886
Q gi|254781166|r  165 AKAALQSAVRYLAMDLGRQSGIRVNALSAGPAKTLASSGISDFRYILKWNEYNSPLGRNITHDEVAKSALYLLSDFSSGV  244 (284)
Q Consensus       165 sKaai~~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~plgR~g~peeiA~av~fL~Sd~s~~i  244 (284)
T Consensus       157 SK~~v~GlTk~lAnEWa~~-ginVNAIAPGY~~T~NT~~lRaD~~Rn~~Il~RIPaGrWG~p~D~~G~aVFLaS~ASdYv  235 (249)
T TIGR01832       157 SKHGVAGLTKLLANEWAAK-GINVNAIAPGYMETNNTQALRADEDRNAAILERIPAGRWGTPEDLGGAAVFLASSASDYV  235 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHC-CCCEEEECCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             6777777899999899873-881531158876645515420317778999731789998484000306888877554343


Q ss_pred             CCCEEEECCCC
Q ss_conf             88689975986
Q gi|254781166|r  245 TGECHYVDAGY  255 (284)
Q Consensus       245 TG~~i~vDGG~  255 (284)
T Consensus       236 ~G~~l~VDGGW  246 (249)
T TIGR01832       236 NGAILAVDGGW  246 (249)
T ss_pred             CCEEEEECCCC
T ss_conf             65066207731