HHsearch alignment for GI: 254781166 and conserved domain: TIGR03201
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=96.51 E-value=0.05 Score=33.08 Aligned_cols=104 Identities=18% Similarity=0.259 Sum_probs=64.0
Q ss_pred HCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCC--HHHHHHHHHHHHH
Q ss_conf 22997899948898841799999999988988999848988999999997138928999888999--9999999999999
Q gi|254781166|r 7 LMKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMDFFMAGHCNVSN--SETIDDVFRNLEK 84 (284)
Q Consensus 7 ~L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~ 84 (284)
T Consensus 164 v~~g~~V~V~G~G---~iGl~a~~~ak~~Ga~Vi~vd~~~~rle~a~~~G----a~~~i--~~~~~~~~~~~~~~~~~~~ 234 (349)
T TIGR03201 164 LKKGDLVIVIGAG---GVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFG----ADLTL--NPKDKSAREVKKLIKAFAK 234 (349)
T ss_pred CCCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCC----CCEEE--CCCCCCHHHHHHHHHHHCC
T ss_conf 8999889998974---8999999999985997999949999999999649----98998--7876778999999975414
Q ss_pred HHCCCC----EEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEECCCC
Q ss_conf 847988----99962721274212586213589998556402640232234678874101221000133
Q gi|254781166|r 85 EWGTID----FLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLMNKGGSMLTLTY 149 (284)
Q Consensus 85 ~~G~iD----~lInnag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m~~~G~IInisS 149 (284)
T Consensus 235 ~~G-~~~~~~~v~e-----------------------------~~G~~~~~~~a~~~~~~gG~iv~vG~ 273 (349)
T TIGR03201 235 ARG-LRSTGWKIFE-----------------------------CSGSKPGQESALSLLSHGGTLVVVGY 273 (349)
T ss_pred CCC-CCCCCCEEEE-----------------------------ECCCHHHHHHHHHHCCCCCEEEEECC
T ss_conf 567-5655636998-----------------------------24888999999997358979999750