HHsearch alignment for GI: 254781166 and conserved domain: TIGR03325
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=100.00 E-value=0 Score=421.05 Aligned_cols=246 Identities=19% Similarity=0.171 Sum_probs=208.6
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf 29978999488988417999999999889889998489889999999971389289998889999999999999999847
Q gi|254781166|r 8 MKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMDFFMAGHCNVSNSETIDDVFRNLEKEWG 87 (284)
Q Consensus 8 L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 87 (284)
T Consensus 3 L~gKvalITGgs~--GIG~aia~~~a~~Ga~V~i~~r~~~~l~~~~~~--~g~~~~~~~~Dv~~~~~~~~~v~~~~~~~G 78 (262)
T TIGR03325 3 LKGEVVLVTGGAS--GLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA--HGDAVVGVEGDVRSLDDHKEAVARCVAAFG 78 (262)
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--CCCCEEEEECCCCCHHHHHHHHHHHHHHHC
T ss_conf 8998899906787--899999999998799999998998999999986--799679998457999999999999999849
Q ss_pred CCCEEEECCCCCCCCC-CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCC-CCCEECCCCCCCCCCCCCHHHHHHH
Q ss_conf 9889996272127421-2586213589998556402640232234678874101-2210001333234677201244544
Q gi|254781166|r 88 TIDFLVHAIAFSDKAE-LTGPYINTTRENFLNTMDVSVYSFTALAARASSLMNK-GGSMLTLTYLGADKVMPHYNCMGPA 165 (284)
Q Consensus 88 ~iD~lInnag~~~~~~-~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m~~-~G~IInisS~~~~~~~p~~~~Y~as 165 (284)
T Consensus 79 ~iDiLVnNAG~~~~~~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~~Y~as 158 (262)
T TIGR03325 79 KIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAA 158 (262)
T ss_pred CCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHH
T ss_conf 98889972651687764345862414999999999974999999999999999709818999871032488996689999
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCC--------CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 899999999999982774237998522387269456318--------993899999982688998766999999999860
Q gi|254781166|r 166 KAALQSAVRYLAMDLGRQSGIRVNALSAGPAKTLASSGI--------SDFRYILKWNEYNSPLGRNITHDEVAKSALYLL 237 (284)
Q Consensus 166 Kaai~~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~~~~--------~~~~~~~~~~~~~~plgR~g~peeiA~av~fL~ 237 (284)
T Consensus 159 Kaal~~ltr~lA~e~~~-~-IRVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeia~av~fL~ 236 (262)
T TIGR03325 159 KHAVVGLVKELAFELAP-Y-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFA 236 (262)
T ss_pred HHHHHHHHHHHHHHHCC-C-CEEEEEEECCCCCCCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 99999999999999759-9-789999537888798675443135554211058999970799899839999999999981
Q ss_pred CH-HHCCCCCCEEEECCCCCEEC
Q ss_conf 98-87886886899759866130
Q gi|254781166|r 238 SD-FSSGVTGECHYVDAGYHIVG 259 (284)
Q Consensus 238 Sd-~s~~iTG~~i~vDGG~s~~g 259 (284)
T Consensus 237 s~~~s~~iTG~~l~VDGG~~~~~ 259 (262)
T TIGR03325 237 TRGDTVPATGAVLNYDGGMGVRG 259 (262)
T ss_pred CCCHHCCEECCEEEECCCCCCCE
T ss_conf 98022694586889794710673