HHsearch alignment for GI: 254781166 and conserved domain: pfam00056
>pfam00056 Ldh_1_N lactate/malate dehydrogenase, NAD binding domain. L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate. The enzyme participates in the citric acid cycle. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. N-terminus (this family) is a Rossmann NAD-binding fold. C-terminus is an unusual alpha+beta fold.
Probab=92.57 E-value=0.79 Score=25.28 Aligned_cols=115 Identities=16% Similarity=0.161 Sum_probs=60.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHH-HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 89994889884179999999998898--8999848988999-99999713892899988899999999999999998479
Q gi|254781166|r 12 RGIVLGVANNRSLAWSIAKMCHAAGA--KVALTWQGDATKK-RIEGLVEGMDFFMAGHCNVSNSETIDDVFRNLEKEWGT 88 (284)
Q Consensus 12 ~~iVtGa~g~~GIG~aiA~~la~~Ga--~Vvi~~~~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 88 (284)
T Consensus 2 KV~IIGagg--~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~-~~~~~~~~---------~~~~~~~~d 69 (142)
T pfam00056 2 KVAVVGAGG--GVGSSLAFALALQGLADELVLVDINKDKAEGVAMDLSHGSTF-LSVPGIVG---------GDDYEALKD 69 (142)
T ss_pred EEEEECCCH--HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCCC-CCCCEEEC---------CCCHHHHCC
T ss_conf 899989877--899999999974796634788505776411799998614434-78876974---------883888378
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEECCCC
Q ss_conf 8899962721274212586213589998556402640232234678874101221000133
Q gi|254781166|r 89 IDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLMNKGGSMLTLTY 149 (284)
Q Consensus 89 iD~lInnag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m~~~G~IInisS 149 (284)
T Consensus 70 aDiVVitaG~~~k-----~g--~~R~dl---l~~Na~I~~~i~~~i~~-~~p~~ivivvtN 119 (142)
T pfam00056 70 ADVVVITAGVPRK-----PG--MTRLDL---LNRNAGIFKDIVPAIAK-SAPDAIVLVVSN 119 (142)
T ss_pred CCEEEEECCCCCC-----CC--CCHHHH---HHHHHHHHHHHHHHHHH-HCCCEEEEEECC
T ss_conf 9999981577789-----99--877899---99746999999999997-699819999459