HHsearch alignment for GI: 254781166 and conserved domain: pfam02254
>pfam02254 TrkA_N TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.
Probab=95.81 E-value=0.03 Score=34.56 Aligned_cols=68 Identities=15% Similarity=0.180 Sum_probs=48.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 99948898841799999999988988999848988999999997138928999888999999999999999984798899
Q gi|254781166|r 13 GIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMDFFMAGHCNVSNSETIDDVFRNLEKEWGTIDFL 92 (284)
Q Consensus 13 ~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~l 92 (284)
T Consensus 1 viI~G~g~---~G~~la~~L~~~~-~v~vId~d~~~~~~~~~---~~--~~vi~GD~~~~~~L~~a------~i~~a~~v 65 (115)
T pfam02254 1 IIIIGYGR---VGRSLAEELREGG-PVVVIDKDPERVEELRE---EG--VPVVVGDATDEEVLEEA------GIEDADAV 65 (115)
T ss_pred CEEECCCH---HHHHHHHHHHHCC-CEEEEECCHHHHHHHHH---CC--CEEEEEECCCHHHHHHH------CCCCCCEE
T ss_conf 99987888---9999999998089-99999998799877886---69--86999956886678761------92028799
Q ss_pred EEC
Q ss_conf 962
Q gi|254781166|r 93 VHA 95 (284)
Q Consensus 93 Inn 95 (284)
T Consensus 66 i~~ 68 (115)
T pfam02254 66 VAA 68 (115)
T ss_pred EEE
T ss_conf 996