HHsearch alignment for GI: 254781166 and conserved domain: pfam05368
>pfam05368 NmrA NmrA-like family. NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.
Probab=98.77 E-value=8.3e-07 Score=64.25 Aligned_cols=197 Identities=15% Similarity=0.104 Sum_probs=110.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 99948898841799999999988988999848988999999997138928999888999999999999999984798899
Q gi|254781166|r 13 GIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMDFFMAGHCNVSNSETIDDVFRNLEKEWGTIDFL 92 (284)
Q Consensus 13 ~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~l 92 (284)
T Consensus 1 IlV~GatG--~iG~~vv~~L~~~g~~Vr~l~R~~~~~-~~~~l~-~~g-ve~v~gD~~d~~sl~~al~-------gvd~v 68 (232)
T pfam05368 1 ILVFGATG--YQGGSVVRASLKAGHPVRALVRDPKSE-LAKSLK-AAG-VELVEGDLDDHESLVEALK-------GVDVV 68 (232)
T ss_pred EEEECCCH--HHHHHHHHHHHHCCCCEEEEECCCCHH-HHHHHH-HCC-CEEEEECCCCHHHHHHHHC-------CCCEE
T ss_conf 09989682--899999999985899389997187366-566664-179-8899906888789999967-------99889
Q ss_pred EECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCC-CCEECCCCCCCCC----CCCCHHHHHHHHH
Q ss_conf 9627212742125862135899985564026402322346788741012-2100013332346----7720124454489
Q gi|254781166|r 93 VHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLMNKG-GSMLTLTYLGADK----VMPHYNCMGPAKA 167 (284)
Q Consensus 93 Innag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m~~~-G~IInisS~~~~~----~~p~~~~Y~asKa 167 (284)
T Consensus 69 ~~~~~~~~~---------~---~~~~--------~~~~~~AA~~---aGVk~~V~-ss~~~~~~~~~~~~~~~~~~~~K~ 124 (232)
T pfam05368 69 FSVTGFWLS---------K---EIED--------GKKLADAAKE---AGVKHFIP-SEFGNDVDRSNGVEPAVPHFDSKA 124 (232)
T ss_pred EEECCCCCC---------H---HHHH--------HHHHHHHHHH---CCCCCEEE-EEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 991588741---------7---7999--------9999999997---39983455-550125545676665527889899
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHH---HHHCCCCCC----CCCHHHHHHHHHHHHCHH
Q ss_conf 9999999999982774237998522387269456318993899999---982688998----766999999999860988
Q gi|254781166|r 168 ALQSAVRYLAMDLGRQSGIRVNALSAGPAKTLASSGISDFRYILKW---NEYNSPLGR----NITHDEVAKSALYLLSDF 240 (284)
Q Consensus 168 ai~~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~~~~~~~~~~~~~---~~~~~plgR----~g~peeiA~av~fL~Sd~ 240 (284)
T Consensus 125 ~~e~~l~~~--------g~~~tilrp~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~l~~p 196 (232)
T pfam05368 125 EVERYIRAL--------GIPYTFVYAGFFMGNFLSNLAPPGDLAPPRDKVTLLGPGNPKAVPLDDEEDIGTYVIKILDDP 196 (232)
T ss_pred HHHHHHHHH--------CCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEHHHHHHHHHHHHCCH
T ss_conf 999999981--------998599968425430165654432025765369994489876112652889999999996491
Q ss_pred HCCCCCCEEEECCC
Q ss_conf 78868868997598
Q gi|254781166|r 241 SSGVTGECHYVDAG 254 (284)
Q Consensus 241 s~~iTG~~i~vDGG 254 (284)
T Consensus 197 ~~~-~~~~~~~~~~ 209 (232)
T pfam05368 197 RKL-KGKYIRPPGN 209 (232)
T ss_pred HHC-CCEEEEECCC
T ss_conf 211-9999982898