BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= gi|254781166|ref|YP_003065579.1| enoyl-(acyl carrier protein) reductase [Candidatus Liberibacter asiaticus str. psy62] (284 letters) Database: las_proteome 1233 sequences; 328,796 total letters Searching...................................................done >gi|254781166|ref|YP_003065579.1| enoyl-(acyl carrier protein) reductase [Candidatus Liberibacter asiaticus str. psy62] Length = 284 Score = 588 bits (1517), Expect = e-170, Method: Compositional matrix adjust. Identities = 284/284 (100%), Positives = 284/284 (100%) Query: 1 MLVVDNLMKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMD 60 MLVVDNLMKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMD Sbjct: 1 MLVVDNLMKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMD 60 Query: 61 FFMAGHCNVSNSETIDDVFRNLEKEWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTM 120 FFMAGHCNVSNSETIDDVFRNLEKEWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTM Sbjct: 61 FFMAGHCNVSNSETIDDVFRNLEKEWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTM 120 Query: 121 DVSVYSFTALAARASSLMNKGGSMLTLTYLGADKVMPHYNCMGPAKAALQSAVRYLAMDL 180 DVSVYSFTALAARASSLMNKGGSMLTLTYLGADKVMPHYNCMGPAKAALQSAVRYLAMDL Sbjct: 121 DVSVYSFTALAARASSLMNKGGSMLTLTYLGADKVMPHYNCMGPAKAALQSAVRYLAMDL 180 Query: 181 GRQSGIRVNALSAGPAKTLASSGISDFRYILKWNEYNSPLGRNITHDEVAKSALYLLSDF 240 GRQSGIRVNALSAGPAKTLASSGISDFRYILKWNEYNSPLGRNITHDEVAKSALYLLSDF Sbjct: 181 GRQSGIRVNALSAGPAKTLASSGISDFRYILKWNEYNSPLGRNITHDEVAKSALYLLSDF 240 Query: 241 SSGVTGECHYVDAGYHIVGMKAEDAPDISVVKEKDPASLSSSVK 284 SSGVTGECHYVDAGYHIVGMKAEDAPDISVVKEKDPASLSSSVK Sbjct: 241 SSGVTGECHYVDAGYHIVGMKAEDAPDISVVKEKDPASLSSSVK 284 >gi|254780462|ref|YP_003064875.1| enoyl-(acyl carrier protein) reductase [Candidatus Liberibacter asiaticus str. psy62] Length = 267 Score = 278 bits (711), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 131/257 (50%), Positives = 191/257 (74%), Gaps = 1/257 (0%) Query: 6 NLMKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMDFFMAG 65 N++K KRG+++GVAN+ S+AW IAK+ H+AGA++A ++QG++ KR++ L +D Sbjct: 3 NILKGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIGKRLKPLALTVDSDFMI 62 Query: 66 HCNVSNSETIDDVFRNLEKEWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVY 125 CNV + ++D +F +++ W T+DF+VH+IAFSDK EL GPY NT+R+NF+ TM VS + Sbjct: 63 PCNVEDPSSMDLLFERIKERWETLDFVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCF 122 Query: 126 SFTALAARASSLMNKGGSMLTLTYLGADKVMPHYNCMGPAKAALQSAVRYLAMDLGRQSG 185 SFT + RA+ LM GG+M+TLTY G+ +V+P+YN M PAK+AL+S+ +YLA D G + Sbjct: 123 SFTEIVRRAAQLMPHGGAMITLTYGGSMRVVPNYNAMAPAKSALESSTKYLACDYGGMN- 181 Query: 186 IRVNALSAGPAKTLASSGISDFRYILKWNEYNSPLGRNITHDEVAKSALYLLSDFSSGVT 245 IR+NA+SAGP +TLA + IS+ R I W++ NSPL R ++ +++ SALYLLS S+GVT Sbjct: 182 IRINAISAGPVRTLAGASISNGRDIAAWSKENSPLKRTVSLEDIGNSALYLLSYLSNGVT 241 Query: 246 GECHYVDAGYHIVGMKA 262 GE HYVD GY+IV M + Sbjct: 242 GEIHYVDCGYNIVAMPS 258 >gi|254780535|ref|YP_003064948.1| 3-ketoacyl-(acyl-carrier-protein) reductase [Candidatus Liberibacter asiaticus str. psy62] Length = 247 Score = 46.2 bits (108), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 122/254 (48%), Gaps = 19/254 (7%) Query: 11 KRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMDFFMAGHCNVS 70 K+ +V G + S+ +IAK+ + GA V L +++ + +D F+ N S Sbjct: 7 KKALVTGASG--SIGLAIAKILYKQGASVGLHGTSQEKLEKVAKNFDDVDRFLLFPANFS 64 Query: 71 NSETIDDVFRNLEKEWGTIDFLVH-AIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTA 129 + +++ + + + +E G +D LV+ A D + Y E++ + + V++ S Sbjct: 65 DRVSVEYLSKRVNEEMGGVDILVNNAGIVRDSLFMRARY-----EDWDDVLSVNLTSAFL 119 Query: 130 LAARASSLM--NKGGSMLTLT-YLGADKVMPHYN-CMGPAKAALQSAVRYLAMDLGRQSG 185 L + LM N+ G ++ +T +G N C AK+ L + LA + GR++ Sbjct: 120 LTRQLVPLMIRNRFGRVINITSVVGFTGNAGQVNYC--AAKSGLTGFTKALAQETGRRN- 176 Query: 186 IRVNALSAGPAKTLASSGISDFRYILKWNEYNS-PLGRNITHDEVAKSALYLLSDFSSGV 244 + VN ++ G + + +++ + K +S P+ R D++A + LYL S +S V Sbjct: 177 VTVNCVAPGFIGSDMTVNLTEDQ---KGKIISSIPMKRMGAVDDIAAAVLYLSSLEASYV 233 Query: 245 TGECHYVDAGYHIV 258 TG+ +V+ G ++ Sbjct: 234 TGQTIHVNGGMAMI 247 >gi|254780938|ref|YP_003065351.1| 4'-phosphopantetheinyl transferase [Candidatus Liberibacter asiaticus str. psy62] Length = 132 Score = 23.9 bits (50), Expect = 3.5, Method: Compositional matrix adjust. Identities = 8/33 (24%), Positives = 18/33 (54%) Query: 16 LGVANNRSLAWSIAKMCHAAGAKVALTWQGDAT 48 +G ++ ++W ++CH G K ++ G A+ Sbjct: 63 IGTGISKGVSWKDIEVCHFPGGKPYISISGRAS 95 >gi|254780503|ref|YP_003064916.1| putative glutamine synthetase [Candidatus Liberibacter asiaticus str. psy62] Length = 461 Score = 23.9 bits (50), Expect = 3.6, Method: Compositional matrix adjust. Identities = 10/22 (45%), Positives = 15/22 (68%) Query: 73 ETIDDVFRNLEKEWGTIDFLVH 94 E IDD+++ EK+ ID L+H Sbjct: 193 EIIDDIWKFSEKQGLEIDTLIH 214 Database: las_proteome Posted date: Jun 5, 2011 6:30 PM Number of letters in database: 328,796 Number of sequences in database: 1233 Lambda K H 0.317 0.131 0.384 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 168,753 Number of Sequences: 1233 Number of extensions: 6402 Number of successful extensions: 17 Number of sequences better than 100.0: 5 Number of HSP's better than 100.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 11 Number of HSP's gapped (non-prelim): 5 length of query: 284 length of database: 328,796 effective HSP length: 73 effective length of query: 211 effective length of database: 238,787 effective search space: 50384057 effective search space used: 50384057 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 38 (19.2 bits)