HHsearch alignment for GI: 254781167 and conserved domain: CHL00162
>CHL00162 thiG thiamin biosynthesis protein G; Validated.
Probab=93.68 E-value=0.33 Score=28.75 Aligned_cols=133 Identities=15% Similarity=0.159 Sum_probs=83.9
Q ss_pred CCCHHHHHHHHHHHHCCC-------CCEEEECC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCC
Q ss_conf 699899999887531045-------37774425-6413677666889999855899999999985027906999861134
Q gi|254781167|r 56 GADISKLVEAAKIVEDFG-------YNEINLNV-GCPSARVHEGSFGACLMLNPDIVGDCIAAMCKALSIPVTVKCRIGV 127 (322)
Q Consensus 56 g~~p~~~~~aa~~~~~~g-------~~~idlN~-GCP~~~v~~~g~GaaLl~~p~~~~~iv~~~~~~~~~pvsvK~RlG~ 127 (322)
T Consensus 80 c~taeEAVr~A~lAREl~~~~g~~~tnwIKLEVi~D~----------~tLlPD~~etl~Aae~Lv~e-GF~VlpY~---- 144 (267)
T CHL00162 80 CQTAEEAIRVAFLGRELAKQLGQEDNNFVKLEVIPDP----------KYLLPDPIGTLKAAEFLVRK-GFTVLPYI---- 144 (267)
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC----------CCCCCCHHHHHHHHHHHHHC-CCEEEEEC----
T ss_conf 2879999999999999853015678977999982798----------77798878999999999978-99998954----
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 56653220145543200012201210013566402577421227661046787666738875302577778998988874
Q gi|254781167|r 128 DDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLNGGLEDMSQALKIL 207 (322)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi~~~~~a~~~l 207 (322)
T Consensus 145 -~-dD----~v~akrLe~~Gc~avMPlgsP-IGSg--------~Gl~n~~~l~~i~e~-~~vPvIVDAGiG~pSdAa~aM 208 (267)
T CHL00162 145 -N-AD----PVLAKQLEDIGCATVMPLGSP-IGSG--------QGLQNLLNLQIIIEN-AKIPVIIDAGIGTPSEASQAM 208 (267)
T ss_pred -C-CC----HHHHHHHHHCCCEEEEECCCC-CCCC--------CCCCCHHHHHHHHHC-CCCCEEEECCCCCHHHHHHHH
T ss_conf -8-99----899999986598688634551-2368--------875899999999964-899889968989678889999
Q ss_pred H-CCCCEEEECCC
Q ss_conf 2-03523441220
Q gi|254781167|r 208 P-SVDGVMIGRAA 219 (322)
Q Consensus 208 ~-~~dgvMigRga 219 (322)
T Consensus 209 ElG~DaVL~NTAI 221 (267)
T CHL00162 209 ELGASGVLLNTAV 221 (267)
T ss_pred HCCCCEEEECHHH
T ss_conf 7467778701676