HHsearch alignment for GI: 254781167 and conserved domain: COG0134
>COG0134 TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism].
Probab=94.80 E-value=0.064 Score=33.94 Aligned_cols=110 Identities=15% Similarity=0.245 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf 58999999999850279069998611345665322014554320001220121001356640257742122766104678
Q gi|254781167|r 100 NPDIVGDCIAAMCKALSIPVTVKCRIGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIV 179 (322)
Q Consensus 100 ~p~~~~~iv~~~~~~~~~pvsvK~RlG~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i 179 (322)
T Consensus 141 ~~~~l~el~~~A~~-LGm~~LVEVh-------~---~eEl~rAl-~~ga~iIGINnRd-----------L~tf~vdl~~t 197 (254)
T COG0134 141 DDEQLEELVDRAHE-LGMEVLVEVH-------N---EEELERAL-KLGAKIIGINNRD-----------LTTLEVDLETT 197 (254)
T ss_pred CHHHHHHHHHHHHH-CCCCEEEEEC-------C---HHHHHHHH-HCCCCEEEEECCC-----------CCHHEECHHHH
T ss_conf 99999999999997-6992389978-------9---99999999-6799889983788-----------40210068899
Q ss_pred HHHHHHCCC-CCCCCCCCCCCHHHHHHHHH-CCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 766673887-53025777789989888742-035234412200012439999998
Q gi|254781167|r 180 YEIKKENPD-LFIGLNGGLEDMSQALKILP-SVDGVMIGRAAYKNSAMLTTVDEY 232 (322)
Q Consensus 180 ~~l~~~~~~-~~i~~NGdi~~~~~a~~~l~-~~dgvMigRga~~~P~if~~I~~~ 232 (322)
T Consensus 198 ~~la~~~p~~~~~IsESGI~~~~dv~~l~~~ga~a~LVG~slM~~~~~~~a~~~l 252 (254)
T COG0134 198 EKLAPLIPKDVILISESGISTPEDVRRLAKAGADAFLVGEALMRADDPEEALREL 252 (254)
T ss_pred HHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHH
T ss_conf 9988448777589961798999999999974899899638885699989999986