HHsearch alignment for GI: 254781167 and conserved domain: COG0159
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism].
Probab=96.98 E-value=0.024 Score=37.16 Aligned_cols=167 Identities=17% Similarity=0.299 Sum_probs=96.8
Q ss_pred CCCCEEEEEECCC--HHHHHHHHHHHHCCCCCEEEECCCCCH-----HHHHHHHHHHHHH--HHHHHHHHHHHHHHCC-C
Q ss_conf 5784699982699--899999887531045377744256413-----6776668899998--5589999999998502-7
Q gi|254781167|r 46 QEKPLALQIGGAD--ISKLVEAAKIVEDFGYNEINLNVGCPS-----ARVHEGSFGACLM--LNPDIVGDCIAAMCKA-L 115 (322)
Q Consensus 46 ~e~p~~~Ql~g~~--p~~~~~aa~~~~~~g~~~idlN~GCP~-----~~v~~~g~GaaLl--~~p~~~~~iv~~~~~~-~ 115 (322)
T Consensus 15 ~~~a~i~yit~GdP~~e~s~e~i~~L~~~GaD~iELGvPfSDPvADGP~Iq~A~-~rAL~~g~t~~~~lel~~~~r~~~~ 93 (265)
T COG0159 15 NRGALIPYVTAGDPDLETSLEIIKTLVEAGADILELGVPFSDPVADGPTIQAAH-LRALAAGVTLEDTLELVEEIRAKGV 93 (265)
T ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHH-HHHHHCCCCHHHHHHHHHHHHHCCC
T ss_conf 789748889488999899999999998679888996688888676688999989-9999779988999999999986189
Q ss_pred CEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHH-------------------------------HHHH-HH----
Q ss_conf 90699986113456653220145543200012201210-------------------------------0135-66----
Q gi|254781167|r 116 SIPVTVKCRIGVDDQIPAVALRNLVKSIKKSGVNGIWI-------------------------------HARK-AI---- 159 (322)
Q Consensus 116 ~~pvsvK~RlG~~~~~~~~~~~~~~~~~~~~g~~~iti-------------------------------H~Rt-~~---- 159 (322)
T Consensus 94 ~~Pivlm~Y~---Npi~~~Gie~F~~~~~~~GvdGlivpDLP~ee~~~~~~~~~~~gi~~I~lvaPtt~~~rl~~i~~~a 170 (265)
T COG0159 94 KVPIVLMTYY---NPIFNYGIEKFLRRAKEAGVDGLLVPDLPPEESDELLKAAEKHGIDPIFLVAPTTPDERLKKIAEAA 170 (265)
T ss_pred CCCEEEEEEC---CHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHC
T ss_conf 9988998701---1887735999999999759987985789866777899999976986798869999989999999747
Q ss_pred --------HHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECC
Q ss_conf --------40257742122766104678766673887530257777899898887420352344122
Q gi|254781167|r 160 --------LKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLNGGLEDMSQALKILPSVDGVMIGRA 218 (322)
Q Consensus 160 --------~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi~~~~~a~~~l~~~dgvMigRg 218 (322)
T Consensus 171 ~GFiY~vs~~GvTG~~~~~~~~-~~~~v~~vr~~~-~~Pv~vGFGIs~~e~~~~v~~~ADGVIVGSA 235 (265)
T COG0159 171 SGFIYYVSRMGVTGARNPVSAD-VKELVKRVRKYT-DVPVLVGFGISSPEQAAQVAEAADGVIVGSA 235 (265)
T ss_pred CCCEEEEECCCCCCCCCCCCHH-HHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHHCCEEEECHH
T ss_conf 9858999666666777653046-999999999744-8973874486999999999976885797399