HHsearch alignment for GI: 254781167 and conserved domain: COG0352

>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism].
Probab=90.76  E-value=0.54  Score=27.16  Aligned_cols=97  Identities=16%  Similarity=0.222  Sum_probs=63.3

Q ss_pred             EEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHH
Q ss_conf             86113456653220145543200012201210013566402577421227661046787666738875302577778998
Q gi|254781167|r  122 KCRIGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLNGGLEDMS  201 (322)
Q Consensus       122 K~RlG~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi~~~~  201 (322)
T Consensus       104 ~~iIG~S~h-~----~eea~~A~~~g~DYv~~Gpi---fpT-~tK~~~--~~~G~~~l~~~~~~~-~iP~vAIGGi~-~~  170 (211)
T COG0352         104 GLIIGLSTH-D----LEEALEAEELGADYVGLGPI---FPT-STKPDA--PPLGLEGLREIRELV-NIPVVAIGGIN-LE  170 (211)
T ss_pred             CCEEEEECC-C----HHHHHHHHHCCCCEEEECCC---CCC-CCCCCC--CCCCHHHHHHHHHHC-CCCEEEECCCC-HH
T ss_conf             978983049-9----99999987639999998886---788-999887--746789999999827-99989984889-99


Q ss_pred             HHHHHH-HCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf             988874-203523441220001243999999
Q gi|254781167|r  202 QALKIL-PSVDGVMIGRAAYKNSAMLTTVDE  231 (322)
Q Consensus       202 ~a~~~l-~~~dgvMigRga~~~P~if~~I~~  231 (322)
T Consensus       171 nv~~v~~~Ga~gVAvvsai~~a~d~~~a~~~  201 (211)
T COG0352         171 NVPEVLEAGADGVAVVSAITSAADPAAAAKA  201 (211)
T ss_pred             HHHHHHHHCCCEEEEHHHHHCCCCHHHHHHH
T ss_conf             9999998298769726686607988999999