HHsearch alignment for GI: 254781167 and conserved domain: COG0352
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism].
Probab=90.76 E-value=0.54 Score=27.16 Aligned_cols=97 Identities=16% Similarity=0.222 Sum_probs=63.3
Q ss_pred EEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHH
Q ss_conf 86113456653220145543200012201210013566402577421227661046787666738875302577778998
Q gi|254781167|r 122 KCRIGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLNGGLEDMS 201 (322)
Q Consensus 122 K~RlG~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi~~~~ 201 (322)
T Consensus 104 ~~iIG~S~h-~----~eea~~A~~~g~DYv~~Gpi---fpT-~tK~~~--~~~G~~~l~~~~~~~-~iP~vAIGGi~-~~ 170 (211)
T COG0352 104 GLIIGLSTH-D----LEEALEAEELGADYVGLGPI---FPT-STKPDA--PPLGLEGLREIRELV-NIPVVAIGGIN-LE 170 (211)
T ss_pred CCEEEEECC-C----HHHHHHHHHCCCCEEEECCC---CCC-CCCCCC--CCCCHHHHHHHHHHC-CCCEEEECCCC-HH
T ss_conf 978983049-9----99999987639999998886---788-999887--746789999999827-99989984889-99
Q ss_pred HHHHHH-HCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 988874-203523441220001243999999
Q gi|254781167|r 202 QALKIL-PSVDGVMIGRAAYKNSAMLTTVDE 231 (322)
Q Consensus 202 ~a~~~l-~~~dgvMigRga~~~P~if~~I~~ 231 (322)
T Consensus 171 nv~~v~~~Ga~gVAvvsai~~a~d~~~a~~~ 201 (211)
T COG0352 171 NVPEVLEAGADGVAVVSAITSAADPAAAAKA 201 (211)
T ss_pred HHHHHHHHCCCEEEEHHHHHCCCCHHHHHHH
T ss_conf 9999998298769726686607988999999