HHsearch alignment for GI: 254781167 and conserved domain: PRK04281
>PRK04281 consensus.
Probab=97.80 E-value=0.00015 Score=53.44 Aligned_cols=169 Identities=12% Similarity=0.265 Sum_probs=109.4
Q ss_pred HHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 83027457846999826998999998875310453777442564136776668899998558999999999850279069
Q gi|254781167|r 40 ILGFSTQEKPLALQIGGADISKLVEAAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKALSIPV 119 (322)
Q Consensus 40 ~~~~~~~e~p~~~Ql~g~~p~~~~~aa~~~~~~g~~~idlN~GCP~~~v~~~g~GaaLl~~p~~~~~iv~~~~~~~~~pv 119 (322)
T Consensus 65 ~I~~i~~~~~vpi~vGGGI-rs~e~~~~ll-~~GadkViig--------------s~a~~np~~l~~~~~~fG~-q~Iv~ 127 (254)
T PRK04281 65 IIEEVAGQVFIPLTVGGGV-RTVADIRRLL-NAGADKVSIN--------------TAAVTRPDLIDEAAGFFGS-QAIVA 127 (254)
T ss_pred HHHHHHHHCCCCEEEECCE-EECHHHHHHH-HCCCCEEEEC--------------HHHHHCCHHHHHHHHHCCC-EEEEE
T ss_conf 9999985079628997775-4518899999-7699889977--------------7676492676767875598-21799
Q ss_pred EEEEEC-------------CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 998611-------------3456653220145543200012201210013566402577421227661046787666738
Q gi|254781167|r 120 TVKCRI-------------GVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKEN 186 (322)
Q Consensus 120 svK~Rl-------------G~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~ 186 (322)
T Consensus 128 siD~k~~~~~~~~~~i~~~g~~~-~t~~~~~~~~~~~~~~g~geil~tdI~--------rDGt~~G-~d~~l~~~i~~~~ 197 (254)
T PRK04281 128 AVDAKAVNPENTRWEIFTHGGRN-PTGLDAVEWAVEMQKRGAGEILLTGMD--------RDGTKQG-FNLPLTRAVAEAV 197 (254)
T ss_pred EEEEEEECCCCCCEEEEECCCCC-CCCCCHHHHHHHHHHCCCCEEEEEEEC--------CCCCCCC-CCHHHHHHHHHHC
T ss_conf 99888502468845999758864-775449999999875299899998885--------7887687-6869999998616
Q ss_pred CCCCCCCCCCCCCHHHHHHHHH--CCCCEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 8753025777789989888742--0352344122000124399999987199
Q gi|254781167|r 187 PDLFIGLNGGLEDMSQALKILP--SVDGVMIGRAAYKNSAMLTTVDEYFSNP 236 (322)
Q Consensus 187 ~~~~i~~NGdi~~~~~a~~~l~--~~dgvMigRga~~~P~if~~I~~~l~~~ 236 (322)
T Consensus 198 -~iPvIasGGv~~~~di~~~~~~~~~~~v~~g~~~~~~~~sl~eak~~l~~~ 248 (254)
T PRK04281 198 -DIPVIASGGVGNVRHLIEGITEGKADAVLAAGIFHFGEIAIREAKRAMREA 248 (254)
T ss_pred -CCCEEEECCCCCHHHHHHHHHHCCCCEEEEHHHHHCCCCCHHHHHHHHHHC
T ss_conf -998999789899999999998089888976437777998999999999986