HHsearch alignment for GI: 254781167 and conserved domain: PRK08649

Probab=92.77  E-value=0.094  Score=32.73  Aligned_cols=78  Identities=13%  Similarity=0.207  Sum_probs=53.1

Q ss_pred             CCCHHHHHHHHCCCCCCHHHHH------HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH---------CCCCCCCCCCCC
Q ss_conf             2201455432000122012100------1356640257742122766104678766673---------887530257777
Q gi|254781167|r  133 AVALRNLVKSIKKSGVNGIWIH------ARKAILKGLSPKDNRKIPNLDYDIVYEIKKE---------NPDLFIGLNGGL  197 (322)
Q Consensus       133 ~~~~~~~~~~~~~~g~~~itiH------~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~---------~~~~~i~~NGdi  197 (322)
T Consensus       193 NVaT~e~a~~Li~aGADaVKVGIGpGSICTTRvVaGvG--------vPQltAI~~~a~a~~~y~~~~~g~~VpvIADGGI  264 (368)
T PRK08649        193 GCVTYTTALHLMRTGAAGVLVGIGPGAACTSRGVLGIG--------VPMATAIADCAAARRDYLDETGGRYVHVIADGGI  264 (368)
T ss_pred             CCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCEECCC--------CHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC
T ss_conf             44699999999977998999456688775663401257--------2169999999999886556526854648956885


Q ss_pred             CCHHHHHHHH-HCCCCEEEECC
Q ss_conf             8998988874-20352344122
Q gi|254781167|r  198 EDMSQALKIL-PSVDGVMIGRA  218 (322)
Q Consensus       198 ~~~~~a~~~l-~~~dgvMigRg  218 (322)
T Consensus       265 r~sGDi~KAlaaGA~~VMlGsl  286 (368)
T PRK08649        265 VTSGDICKAIACGADAVMLGSP  286 (368)
T ss_pred             CCCCHHHHHHHCCCCEEEECCC
T ss_conf             8641899998728998987731