HHsearch alignment for GI: 254781167 and conserved domain: PRK13111

>PRK13111 trpA tryptophan synthase subunit alpha; Provisional.
Probab=97.12  E-value=0.013  Score=39.15  Aligned_cols=166  Identities=20%  Similarity=0.240  Sum_probs=91.5

Q ss_pred             CEEEEEECCCH--HHHHHHHHHHHCCCCCEEEECC--CCCH--HHHHHHHHHHHHH--HHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             46999826998--9999988753104537774425--6413--6776668899998--5589999999998502790699
Q gi|254781167|r   49 PLALQIGGADI--SKLVEAAKIVEDFGYNEINLNV--GCPS--ARVHEGSFGACLM--LNPDIVGDCIAAMCKALSIPVT  120 (322)
Q Consensus        49 p~~~Ql~g~~p--~~~~~aa~~~~~~g~~~idlN~--GCP~--~~v~~~g~GaaLl--~~p~~~~~iv~~~~~~~~~pvs  120 (322)
T Consensus        10 ali~y~taG~P~~e~~~~~~~~l~~~Gad~iEiGiPfSDP~aDGpvIq~a~~~AL~~G~~~~~~f~~~~~~r~~~~~piv   89 (256)
T PRK13111         10 ALIPYITAGDPDLETSLEILKALVEAGADIIELGIPFSDPVADGPVIQRASLRALAAGVTLADVLELLREIRAKPTIPIV   89 (256)
T ss_pred             EEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEE
T ss_conf             68988707089989999999999965999999788878876657999999999997799699999999998606899889


Q ss_pred             EEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHH-------------------------------HHHHH----------
Q ss_conf             9861134566532201455432000122012100-------------------------------13566----------
Q gi|254781167|r  121 VKCRIGVDDQIPAVALRNLVKSIKKSGVNGIWIH-------------------------------ARKAI----------  159 (322)
Q Consensus       121 vK~RlG~~~~~~~~~~~~~~~~~~~~g~~~itiH-------------------------------~Rt~~----------  159 (322)
T Consensus        90 lM~---Y~N~i~~~G~e~F~~~~~~~GvdGvIipDLP~eE~~~~~~~~~~~gi~~I~lvaPtt~~~Ri~~i~~~s~gfiY  166 (256)
T PRK13111         90 LMT---YYNPIFQYGVEAFAADAAEAGVDGLIIPDLPPEEAEEFRAAAKKHGIDLIFLVAPTTTDERLKKIASHASGFVY  166 (256)
T ss_pred             EEE---ECCHHHHHCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCEEE
T ss_conf             985---03089870999999999975997798169997888999999997598089996999988999999962698599


Q ss_pred             ---HHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCC
Q ss_conf             ---402577421227661046787666738875302577778998988874203523441220
Q gi|254781167|r  160 ---LKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLNGGLEDMSQALKILPSVDGVMIGRAA  219 (322)
Q Consensus       160 ---~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi~~~~~a~~~l~~~dgvMigRga  219 (322)
T Consensus       167 ~vs~~GvTG~~~-~~~~~~~~~i~~ik~~-t~~Pi~vGFGIs~~e~v~~~~~~aDGvIVGSai  227 (256)
T PRK13111        167 YVSRAGVTGARS-ADAADVADLLARLKAH-TDLPVAVGFGISTPEQAAAIAEGADGVIVGSAL  227 (256)
T ss_pred             EEECCCCCCCCC-CCHHHHHHHHHHHHHC-CCCCEEEECCCCCHHHHHHHHCCCCEEEECHHH
T ss_conf             985677678876-6628899999999870-689758852889999999997459999986899