HHsearch alignment for GI: 254781167 and conserved domain: PRK13140
>PRK13140 consensus.
Probab=97.02 E-value=0.016 Score=38.50 Aligned_cols=168 Identities=18% Similarity=0.200 Sum_probs=95.6
Q ss_pred CEEEEEECCCH--HHHHHHHHHHHCCCCCEEEEC--CCCCHH--HHHHHHHHHHHHH--HHHHHHHHHHHHHCCCCEEEE
Q ss_conf 46999826998--999998875310453777442--564136--7766688999985--589999999998502790699
Q gi|254781167|r 49 PLALQIGGADI--SKLVEAAKIVEDFGYNEINLN--VGCPSA--RVHEGSFGACLML--NPDIVGDCIAAMCKALSIPVT 120 (322)
Q Consensus 49 p~~~Ql~g~~p--~~~~~aa~~~~~~g~~~idlN--~GCP~~--~v~~~g~GaaLl~--~p~~~~~iv~~~~~~~~~pvs 120 (322)
T Consensus 15 ~li~y~taG~P~~~~s~~~~~~l~~~GaDiiElGiPfSDP~ADGpvIq~A~~rAL~~G~~~~~~~~~~~~~r~~~~~piv 94 (257)
T PRK13140 15 ILSIYFTAGYPTLEDTVSIIKDLEKHGVDMIEIGIPFSDPLADGPVIQKSATQALKNGMTLKLLFEQLKDIRKEVQIPLI 94 (257)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEE
T ss_conf 16888818289879999999999975999999789889877658999999999998699899999999997436898889
Q ss_pred EEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHH-------H-------HH----------------HH-----------
Q ss_conf 9861134566532201455432000122012100-------1-------35----------------66-----------
Q gi|254781167|r 121 VKCRIGVDDQIPAVALRNLVKSIKKSGVNGIWIH-------A-------RK----------------AI----------- 159 (322)
Q Consensus 121 vK~RlG~~~~~~~~~~~~~~~~~~~~g~~~itiH-------~-------Rt----------------~~----------- 159 (322)
T Consensus 95 l---M~Y~N~i~~~G~e~F~~~~~~~GvdGlIipDLP~ee~~~~~~~~~~~~~i~~I~lvaPtt~~~Ri~~i~~~a~gFi 171 (257)
T PRK13140 95 L---MGYLNPIMQYGFEKFCKKCAETGIDGVIIPDLPFDDYQEHYKEIFEKYGLKNIMLITPQTSEERIREIDSHTDGFI 171 (257)
T ss_pred E---EECHHHHHHHCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCE
T ss_conf 9---9055999851799999999984998698359985675899999999869977998689998999999997399966
Q ss_pred ----HHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCC
Q ss_conf ----4025774212276610467876667388753025777789989888742035234412200
Q gi|254781167|r 160 ----LKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLNGGLEDMSQALKILPSVDGVMIGRAAY 220 (322)
Q Consensus 160 ----~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi~~~~~a~~~l~~~dgvMigRga~ 220 (322)
T Consensus 172 Y~vs~~GvTG~~~-~~~~~~~~~i~~ik~~~~~~Pv~vGFGIs~~e~v~~~~~~aDGvIVGSaiv 235 (257)
T PRK13140 172 YMVSSASTTGAQQ-DFNNQKRAYFKRIKDMNLKNPRMVGFGISNKATFNAACEYASGAIIGSAFV 235 (257)
T ss_pred EECCCCCCCCCCC-CCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCEEEECHHHH
T ss_conf 8703656668876-651568999999998278998699805798999999983199999879999