HHsearch alignment for GI: 254781167 and conserved domain: TIGR01108
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit; InterPro: IPR005776 This family describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea . The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.; GO: 0008948 oxaloacetate decarboxylase activity, 0006814 sodium ion transport.
Probab=96.11 E-value=0.088 Score=32.95 Aligned_cols=109 Identities=26% Similarity=0.289 Sum_probs=67.8
Q ss_pred CCHHHHHHH-HHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE-EEEEEEECCCC--CCCC
Q ss_conf 998999998-8753104537774425641367766688999985589999999998502790-69998611345--6653
Q gi|254781167|r 57 ADISKLVEA-AKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKALSI-PVTVKCRIGVD--DQIP 132 (322)
Q Consensus 57 ~~p~~~~~a-a~~~~~~g~~~idlN~GCP~~~v~~~g~GaaLl~~p~~~~~iv~~~~~~~~~-pvsvK~RlG~~--~~~~ 132 (322)
T Consensus 87 HYADDVVe~FV~~a~~NG~DVFRiF---------------DALND~RNl~~ai~a~Kk~-g~dHv--Qg~iSYTtSPvHT 148 (616)
T TIGR01108 87 HYADDVVEAFVKKAVENGLDVFRIF---------------DALNDPRNLQKAIEAAKKH-GADHV--QGAISYTTSPVHT 148 (616)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEE---------------CCCCCHHHHHHHHHHHHHH-CCCEE--EEEEECCCCCHHH
T ss_conf 5843689999999997598089951---------------2458877899999999973-89789--9997124684367
Q ss_pred CCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 2201455432000122012100135664025774212276610467876667388753025
Q gi|254781167|r 133 AVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGL 193 (322)
Q Consensus 133 ~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~ 193 (322)
T Consensus 149 l~~yl~la~~L~~~G~DSI~I---KDMaGlLTP~-------~AYELV~alK~~~~n~pvhL 199 (616)
T TIGR01108 149 LEKYLELAKELLEMGVDSICI---KDMAGLLTPK-------VAYELVSALKKEFGNLPVHL 199 (616)
T ss_pred HHHHHHHHHHHHHHCCCEEEE---ECCCCCCCHH-------HHHHHHHHHHHHCCCEEEEE
T ss_conf 888999999999818860552---0200464415-------89999999974239746886