HHsearch alignment for GI: 254781167 and conserved domain: TIGR03572
>TIGR03572 WbuZ glycosyl amidation-associated protein WbuZ. This clade of sequences is highly similar to the HisF protein, but generally represents the second HisF homolog in the genome where the other is an authentic HisF observed in the context of a complete histidine biosynthesis operon. The similarity between these WbuZ sequences and true HisFs is such that often the closest match by BLAST of a WbuZ is a HisF. Only by making a multiple sequence alignment is the homology relationship among the WbuZ sequences made apparent. WbuZ genes are invariably observed in the presence of a homolog of the HisH protein (designated WbuY) and a proposed N-acetyl sugar amidotransferase designated in WbuX in E. coli, IfnA in P. aeriginosa and PseA in C. jejuni. Similarly, this trio of genes is invariably found in the context of saccharide biosynthesis loci. It has been shown that the WbuYZ homologs are not essential components of the activity expressed by WbuX, leading to the proposal that these to pr
Probab=97.78 E-value=0.00031 Score=51.05 Aligned_cols=151 Identities=13% Similarity=0.273 Sum_probs=99.3
Q ss_pred HHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 98302745784699982699899999887531045377744256413677666889999855899999999985027906
Q gi|254781167|r 39 NILGFSTQEKPLALQIGGADISKLVEAAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKALSIP 118 (322)
Q Consensus 39 ~~~~~~~~e~p~~~Ql~g~~p~~~~~aa~~~~~~g~~~idlN~GCP~~~v~~~g~GaaLl~~p~~~~~iv~~~~~~~~~p 118 (322)
T Consensus 64 ~~I~~i~~~~~ipi~vGGGI-rs~e~~~~ll-~~GadkVii--------------gs~a~~~p~~~~~~~~~~G~-q~iv 126 (232)
T TIGR03572 64 ELISNLAEECFMPLTVGGGI-RSLEDAKKLL-SLGADKVSI--------------NTAALENPDLIEEAARRFGS-QCVV 126 (232)
T ss_pred HHHHHHHHHCCCCEEEEECE-EEHHHHHHHH-HCCCCEEEE--------------CHHHHHCCHHHHHHHHHCCC-CCEE
T ss_conf 99999999729858997133-0389999999-769968993--------------45452193577899998699-4589
Q ss_pred EEEEEEC------------CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 9998611------------3456653220145543200012201210013566402577421227661046787666738
Q gi|254781167|r 119 VTVKCRI------------GVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKEN 186 (322)
Q Consensus 119 vsvK~Rl------------G~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~ 186 (322)
T Consensus 127 vsiD~k~~~~~~~~~v~~~g~~~~-~~~~~~~~i~~~~~~g~geii~tdI~--------~DG~~~G-~d~~l~~~i~~~~ 196 (232)
T TIGR03572 127 VSIDVKKELDGSDYKVYSDNGRRA-TGRDPVEWAREAEQLGAGEILLNSID--------RDGTMKG-YDLELIKTVSDAV 196 (232)
T ss_pred EEEEEECCCCCCCEEEEECCCCCC-CCCCHHHHHHHHHHCCCCEEEEEEEC--------CCCCCCC-CCHHHHHHHHHHC
T ss_conf 999984167787279996677635-79879999999873599899998885--------7685676-8999999999868
Q ss_pred CCCCCCCCCCCCCHHHHHHHH--HCCCCEEEEC
Q ss_conf 875302577778998988874--2035234412
Q gi|254781167|r 187 PDLFIGLNGGLEDMSQALKIL--PSVDGVMIGR 217 (322)
Q Consensus 187 ~~~~i~~NGdi~~~~~a~~~l--~~~dgvMigR 217 (322)
T Consensus 197 -~~piiasGGi~~~~di~~l~~~~~~~gv~~gs 228 (232)
T TIGR03572 197 -SIPVIALGGAGSLDDLVEVALEAGASAVAAAS 228 (232)
T ss_pred -CCCEEEECCCCCHHHHHHHHHHCCCEEEEEEE
T ss_conf -99999988989999999999858981999721