HHsearch alignment for GI: 254781167 and conserved domain: cd00381
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the guanine nucleotides. There is often a CBS domain inserted in the middle of this domain, which is proposed to play a regulatory role. IMPDH is a key enzyme in the regulation of cell proliferation and differentiation. It has been identified as an attractive target for developing chemotherapeutic agents.
Probab=96.52 E-value=0.013 Score=39.09 Aligned_cols=92 Identities=21% Similarity=0.294 Sum_probs=61.5
Q ss_pred HHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 99999985027906999861134566532201455432000122012100135664025774212276610467876667
Q gi|254781167|r 105 GDCIAAMCKALSIPVTVKCRIGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKK 184 (322)
Q Consensus 105 ~~iv~~~~~~~~~pvsvK~RlG~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~ 184 (322)
T Consensus 73 ~~~v~~vk~~~~v~aaig~~---------~~~~~r~~~l~~ag~d~i~IDvA----hG~~-------~-~~~~~ik~ir~ 131 (325)
T cd00381 73 AEEVRKVKGRLLVGAAVGTR---------EDDKERAEALVEAGVDVIVIDSA----HGHS-------V-YVIEMIKFIKK 131 (325)
T ss_pred HHHHHHHHCCEEEEEEECCC---------HHHHHHHHHHHHCCCCEEEEECH----HCCC-------H-HHHHHHHHHHH
T ss_conf 99999750476999997668---------62899999999769989998700----0345-------8-89999999997
Q ss_pred HCCCCCCCCCCCCCCHHHHHHHH-HCCCCEEEECC
Q ss_conf 38875302577778998988874-20352344122
Q gi|254781167|r 185 ENPDLFIGLNGGLEDMSQALKIL-PSVDGVMIGRA 218 (322)
Q Consensus 185 ~~~~~~i~~NGdi~~~~~a~~~l-~~~dgvMigRg 218 (322)
T Consensus 132 ~~p~~~Ii-aGNV~T~e~a~~L~~~GaD~vkVGiG 165 (325)
T cd00381 132 KYPNVDVI-AGNVVTAEAARDLIDAGADGVKVGIG 165 (325)
T ss_pred HCCCCCEE-ECCCCCHHHHHHHHHCCCCEEEECCC
T ss_conf 68997568-64566899999998669989997575