HHsearch alignment for GI: 254781167 and conserved domain: cd00740
>cd00740 MeTr MeTr subgroup of pterin binding enzymes. This family includes cobalamin-dependent methyltransferases such as methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) and methionine synthase (MetH). Cobalamin-dependent methyltransferases catalyze the transfer of a methyl group via a methyl- cob(III)amide intermediate. These include MeTr, a functional heterodimer, and the folate binding domain of MetH.
Probab=92.89 E-value=0.3 Score=28.97 Aligned_cols=139 Identities=11% Similarity=0.156 Sum_probs=79.2
Q ss_pred EECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC
Q ss_conf 82699899999887531045377744256413677666889999855899999999985027906999861134566532
Q gi|254781167|r 54 IGGADISKLVEAAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKALSIPVTVKCRIGVDDQIPA 133 (322)
Q Consensus 54 l~g~~p~~~~~aa~~~~~~g~~~idlN~GCP~~~v~~~g~GaaLl~~p~~~~~iv~~~~~~~~~pvsvK~RlG~~~~~~~ 133 (322)
T Consensus 20 i~~~d~~~i~~~A~~Q~~~GA~~LDVN~g~~~------------~de~~~M~~~v~~vq~~~~~Pl~iDS-------~~~ 80 (252)
T cd00740 20 IKAEDYDEALDVARQQVEGGAQILDLNVDYGG------------LDGVSAMKWLLNLLATEPTVPLMLDS-------TNW 80 (252)
T ss_pred HHCCCHHHHHHHHHHHHHCCCCEEEECCCCCC------------CCHHHHHHHHHHHHHCCCCCCEEEEC-------CCH
T ss_conf 98579899999999999849988995289645------------36599999999998547899857617-------989
Q ss_pred CCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC----CCCCCCCHHHHHH----
Q ss_conf 20145543200012201210013566402577421227661046787666738875302----5777789989888----
Q gi|254781167|r 134 VALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIG----LNGGLEDMSQALK---- 205 (322)
Q Consensus 134 ~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~----~NGdi~~~~~a~~---- 205 (322)
T Consensus 81 ----~~----iEaaLk--~~~Gr-~iINSis~e----~g~er~~~i~pLakkyga~vI~L~~de~Gip~t~e~R~~ia~~ 145 (252)
T cd00740 81 ----EV----IEAGLK--CCQGK-CVVNSINLE----DGEERFLKVARLAKEHGAAVVVLAFDEQGQAKTRDKKVEIAER 145 (252)
T ss_pred ----HH----HHHHHH--HCCCC-EEEECCCCC----CCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHH
T ss_conf ----99----999999--76998-677416344----5488999999999870998999952899998999999999999
Q ss_pred HHHCCCC-EEE-ECCCCCHHHHH
Q ss_conf 7420352-344-12200012439
Q gi|254781167|r 206 ILPSVDG-VMI-GRAAYKNSAML 226 (322)
Q Consensus 206 ~l~~~dg-vMi-gRga~~~P~if 226 (322)
T Consensus 146 i~~~~~~~~Gi~~edI~~DpLv~ 168 (252)
T cd00740 146 AYEALTEFVGFPPEDIIFDPLIL 168 (252)
T ss_pred HHHHHHHHCCCCHHHEEEECCHH
T ss_conf 99999985699889978866357