HHsearch alignment for GI: 254781167 and conserved domain: cd02933
>cd02933 OYE_like_FMN Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include 12-oxophytodienoate reductase, pentaerythritol tetranitrate reductase, morphinone reductase, and related enzymes.
Probab=98.98 E-value=2e-09 Score=89.23 Aligned_cols=215 Identities=16% Similarity=0.214 Sum_probs=139.5
Q ss_pred CCHHHHHHHHHHCCCEEEECCCCCC--HHHHCC------CH------HHHH-HCCCCCCCEEEEEECC------------
Q ss_conf 6078999999828982998170332--477608------97------8983-0274578469998269------------
Q gi|254781167|r 5 TDRHYRFFARLLTNNALLYTEMIVA--DAILRG------DK------KNIL-GFSTQEKPLALQIGGA------------ 57 (322)
Q Consensus 5 Td~~fR~l~r~~~~~~~~~TEmi~a--~~l~~~------~~------~~~~-~~~~~e~p~~~Ql~g~------------ 57 (322)
T Consensus 34 t~~~~~yy~~rA-g~GlIi~e~~~V~~~g~~~~~~~~l~~d~~i~~~~~l~~~vh~~Ga~~~~QL~H~Gr~~~~~~~~~g 112 (338)
T cd02933 34 TDLMAEYYAQRA-SAGLIITEATQISPQGQGYPNTPGIYTDEQVEGWKKVTDAVHAKGGKIFLQLWHVGRVSHPSLLPGG 112 (338)
T ss_pred CHHHHHHHHHHC-CCCEEEECCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCC
T ss_conf 999999999858-8557997236975420469998732239999999999999985589558875026766786355689
Q ss_pred -C------------------------H------------HHHHHHHHHHHCCCCCEEEECCC---------CCHHHHHHH
Q ss_conf -9------------------------8------------99999887531045377744256---------413677666
Q gi|254781167|r 58 -D------------------------I------------SKLVEAAKIVEDFGYNEINLNVG---------CPSARVHEG 91 (322)
Q Consensus 58 -~------------------------p------------~~~~~aa~~~~~~g~~~idlN~G---------CP~~~v~~~ 91 (322)
T Consensus 113 ~~~~apS~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~f~~aA~ra~~AGfDgVEiHaaHGyLl~qFLSp~~N~RtD 192 (338)
T cd02933 113 APPVAPSAIAAEGKVFTPAGKVPYPTPRALTTEEIPGIVADFRQAARNAIEAGFDGVEIHGANGYLIDQFLRDGSNKRTD 192 (338)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCCCCC
T ss_conf 96053688877877545566668888855899999999999999999999839999998224406899853853268989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEE-EEEEEE-----CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 889999855899999999985027906-999861-----13456653220145543200012201210013566402577
Q gi|254781167|r 92 SFGACLMLNPDIVGDCIAAMCKALSIP-VTVKCR-----IGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSP 165 (322)
Q Consensus 92 g~GaaLl~~p~~~~~iv~~~~~~~~~p-vsvK~R-----lG~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~ 165 (322)
T Consensus 193 eYGGS~eNR~Rf~~Eii~aIR~~vg~d~i~vRlSp~~~~~g~~~~~~~~~~~~~~~~l~~~gid~~~v~--~~~~~---~ 267 (338)
T cd02933 193 EYGGSIENRARFLLEVVDAVAEAIGADRVGIRLSPFGTFNDMGDSDPEATFSYLAKELNKRGLAYLHLV--EPRVA---G 267 (338)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE--CCCCC---C
T ss_conf 789998999899999999999972987089996576676887888779999999999998599889972--68777---7
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH-C-CCCEEEECCCCCHHHHHHHHHH
Q ss_conf 4212276610467876667388753025777789989888742-0-3523441220001243999999
Q gi|254781167|r 166 KDNRKIPNLDYDIVYEIKKENPDLFIGLNGGLEDMSQALKILP-S-VDGVMIGRAAYKNSAMLTTVDE 231 (322)
Q Consensus 166 ~~~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi~~~~~a~~~l~-~-~dgvMigRga~~~P~if~~I~~ 231 (322)
T Consensus 268 ---~~~-~~~~~~~~~ir~~~-~~pvi~~G~i-~~~~ae~~l~~G~~D~V~~gR~liaDP~~~~K~~~ 329 (338)
T cd02933 268 ---NPE-DQPPDFLDFLRKAF-KGPLIAAGGY-DAESAEAALADGKADLVAFGRPFIANPDLVERLKN 329 (338)
T ss_pred ---CCC-CCCHHHHHHHHHHC-CCCEEEECCC-CHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHC
T ss_conf ---777-76577999999986-9979996998-99999999987996036852999879139999963