HHsearch alignment for GI: 254781167 and conserved domain: cd03321
>cd03321 mandelate_racemase Mandelate racemase (MR) catalyzes the Mg2+-dependent 1,1-proton transfer reaction that interconverts the enantiomers of mandelic acid. MR is the first enzyme in the bacterial pathway that converts mandelic acid to benzoic acid and allows this pathway to utilize either enantiomer of mandelate. MR belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=94.00 E-value=0.58 Score=26.91 Aligned_cols=143 Identities=15% Similarity=0.139 Sum_probs=84.4
Q ss_pred HHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 83027457846999826998999998875310453777442564136776668899998558999999999850279069
Q gi|254781167|r 40 ILGFSTQEKPLALQIGGADISKLVEAAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKALSIPV 119 (322)
Q Consensus 40 ~~~~~~~e~p~~~Ql~g~~p~~~~~aa~~~~~~g~~~idlN~GCP~~~v~~~g~GaaLl~~p~~~~~iv~~~~~~~~~pv 119 (322)
T Consensus 123 LLGg~~~~v~~~~s~~~~~~~~~~~~a~~~~~~Gf~~~KiKvG~~~~---------------~~D~~~v~~ir~~~g~-- 185 (355)
T cd03321 123 LLGGNPRPVQAYDSHGLDGAKLATERAVTAAEEGFHAVKTKIGYPTA---------------DEDLAVVRSIRQAVGD-- 185 (355)
T ss_pred HHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCH---------------HHHHHHHHHHHHHHCC--
T ss_conf 90899875025623678999999999999997599989997999998---------------9999999999997199--
Q ss_pred EEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 99861134566532201455432000122012100135664025774212276610467876667388753025777789
Q gi|254781167|r 120 TVKCRIGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLNGGLED 199 (322)
Q Consensus 120 svK~RlG~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi~~ 199 (322)
T Consensus 186 ~~~l~vDaN~~~~~~~A~~~~~~l~~~~~~~~E----------------qP~~~~d~~~~~~l~~~~-~~pI~~~E~~~~ 248 (355)
T cd03321 186 GVGLMVDYNQSLTVPEAIERGQALDQEGLTWIE----------------EPTLQHDYEGHARIASAL-RTPVQMGENWLG 248 (355)
T ss_pred CCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEE----------------CCCCCCCHHHHHHHHHCC-CCCEEECCCCCC
T ss_conf 965973575676889999999975230577553----------------789988999999998548-999993788899
Q ss_pred HHHHHHHHH--CCCCEEEE
Q ss_conf 989888742--03523441
Q gi|254781167|r 200 MSQALKILP--SVDGVMIG 216 (322)
Q Consensus 200 ~~~a~~~l~--~~dgvMig 216 (322)
T Consensus 249 ~~~~~~~i~~~a~d~~~~d 267 (355)
T cd03321 249 PEEMFKALSAGACDLVMPD 267 (355)
T ss_pred HHHHHHHHHCCCCCCCCCC
T ss_conf 9999999984999610367