HHsearch alignment for GI: 254781167 and conserved domain: cd03321

>cd03321 mandelate_racemase Mandelate racemase (MR) catalyzes the Mg2+-dependent 1,1-proton transfer reaction that interconverts the enantiomers of mandelic acid. MR is the first enzyme in the bacterial pathway that converts mandelic acid to benzoic acid and allows this pathway to utilize either enantiomer of mandelate. MR belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=94.00  E-value=0.58  Score=26.91  Aligned_cols=143  Identities=15%  Similarity=0.139  Sum_probs=84.4

Q ss_pred             HHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf             83027457846999826998999998875310453777442564136776668899998558999999999850279069
Q gi|254781167|r   40 ILGFSTQEKPLALQIGGADISKLVEAAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKALSIPV  119 (322)
Q Consensus        40 ~~~~~~~e~p~~~Ql~g~~p~~~~~aa~~~~~~g~~~idlN~GCP~~~v~~~g~GaaLl~~p~~~~~iv~~~~~~~~~pv  119 (322)
T Consensus       123 LLGg~~~~v~~~~s~~~~~~~~~~~~a~~~~~~Gf~~~KiKvG~~~~---------------~~D~~~v~~ir~~~g~--  185 (355)
T cd03321         123 LLGGNPRPVQAYDSHGLDGAKLATERAVTAAEEGFHAVKTKIGYPTA---------------DEDLAVVRSIRQAVGD--  185 (355)
T ss_pred             HHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCH---------------HHHHHHHHHHHHHHCC--
T ss_conf             90899875025623678999999999999997599989997999998---------------9999999999997199--


Q ss_pred             EEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             99861134566532201455432000122012100135664025774212276610467876667388753025777789
Q gi|254781167|r  120 TVKCRIGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLNGGLED  199 (322)
Q Consensus       120 svK~RlG~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi~~  199 (322)
T Consensus       186 ~~~l~vDaN~~~~~~~A~~~~~~l~~~~~~~~E----------------qP~~~~d~~~~~~l~~~~-~~pI~~~E~~~~  248 (355)
T cd03321         186 GVGLMVDYNQSLTVPEAIERGQALDQEGLTWIE----------------EPTLQHDYEGHARIASAL-RTPVQMGENWLG  248 (355)
T ss_pred             CCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEE----------------CCCCCCCHHHHHHHHHCC-CCCEEECCCCCC
T ss_conf             965973575676889999999975230577553----------------789988999999998548-999993788899


Q ss_pred             HHHHHHHHH--CCCCEEEE
Q ss_conf             989888742--03523441
Q gi|254781167|r  200 MSQALKILP--SVDGVMIG  216 (322)
Q Consensus       200 ~~~a~~~l~--~~dgvMig  216 (322)
T Consensus       249 ~~~~~~~i~~~a~d~~~~d  267 (355)
T cd03321         249 PEEMFKALSAGACDLVMPD  267 (355)
T ss_pred             HHHHHHHHHCCCCCCCCCC
T ss_conf             9999999984999610367