HHsearch alignment for GI: 254781167 and conserved domain: cd03327
>cd03327 MR_like_2 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 2. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. This subgroup's function is unknown.
Probab=94.02 E-value=0.57 Score=26.94 Aligned_cols=163 Identities=17% Similarity=0.153 Sum_probs=99.2
Q ss_pred HHHHC-CCCCCCEEE-EEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-
Q ss_conf 98302-745784699-982699899999887531045377744256413677666889999855899999999985027-
Q gi|254781167|r 39 NILGF-STQEKPLAL-QIGGADISKLVEAAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKAL- 115 (322)
Q Consensus 39 ~~~~~-~~~e~p~~~-Ql~g~~p~~~~~aa~~~~~~g~~~idlN~GCP~~~v~~~g~GaaLl~~p~~~~~iv~~~~~~~- 115 (322)
T Consensus 99 ~LLGG~~r~~i~~Yas~~~~~~~~~~~~~a~~~~~~Gf~~~Kik~g~~p~-----~~~~~~~~d----~~~v~avr~~~G 169 (341)
T cd03327 99 KLLGGRTRDKIPAYASGLYPTDLDELPDEAKEYLKEGYRGMKMRFGYGPS-----DGHAGLRKN----VELVRAIREAVG 169 (341)
T ss_pred HHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCC-----CCHHHHHHH----HHHHHHHHHHHC
T ss_conf 99379876760267852789999999999999998399879971577887-----504459999----999999999839
Q ss_pred -CEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
Q ss_conf -9069998611345665322014554320001220121001356640257742122766104678766673887530257
Q gi|254781167|r 116 -SIPVTVKCRIGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLN 194 (322)
Q Consensus 116 -~~pvsvK~RlG~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~N 194 (322)
T Consensus 170 ~~~~l~vD~n~~~~----~~~A~~~~~~l~~~~~~w~Ee----------------P~~~~d~~~~~~l~~~~-~ipIa~g 228 (341)
T cd03327 170 YDVDLMLDCYMSWN----LNYAIKMARALEKYELRWIEE----------------PLIPDDIEGYAELKKAT-GIPISTG 228 (341)
T ss_pred CCCEEECCCCCCCC----HHHHHHHHHHHHHCCCEEEEC----------------CCCCCCHHHHHHHHHCC-CCCEEEC
T ss_conf 99669703555899----999999977641046013646----------------89967899999987309-9989809
Q ss_pred CCCCCHHHHHHHHH--CCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 77789989888742--03523441220001243999999
Q gi|254781167|r 195 GGLEDMSQALKILP--SVDGVMIGRAAYKNSAMLTTVDE 231 (322)
Q Consensus 195 Gdi~~~~~a~~~l~--~~dgvMigRga~~~P~if~~I~~ 231 (322)
T Consensus 229 E~~~~~~~~~~~i~~~a~di~~~d~~~~GGit~~~~ia~ 267 (341)
T cd03327 229 EHEYTVYGFKRLLEGRAVDILQPDVNWVGGITELKKIAA 267 (341)
T ss_pred CCCCCHHHHHHHHHHHCCCEEEECCCEECCHHHHHHHHH
T ss_conf 888899999999986188979824353186999999999