HHsearch alignment for GI: 254781167 and conserved domain: cd04723

>cd04723 HisA_HisF Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase (HisA) and the cyclase subunit of imidazoleglycerol phosphate synthase (HisF). The ProFAR isomerase catalyzes the fourth step in histidine biosynthesis, an isomerisation of the aminoaldose moiety of ProFAR to the aminoketose of PRFAR (N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phospho-ribosyl)-4-imidazolecarboxamide). In bacteria and archaea, ProFAR isomerase is encoded by the HisA gene. The Imidazole glycerol phosphate synthase (IGPS) catalyzes the fifth step of histidine biosynthesis, the formation of the imidazole ring. IGPS converts N1-(5'-phosphoribulosyl)-formimino-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to imidazole glycerol phosphate (ImGP) and 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR). This conversion involves two tightly coupled reactions in distinct active sites of IGPS. The two catalytic domains can be fused, like in fungi and pl
Probab=96.52  E-value=0.0045  Score=42.45  Aligned_cols=89  Identities=15%  Similarity=0.211  Sum_probs=68.4

Q ss_pred             CCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH-CCCC
Q ss_conf             201455432000122012100135664025774212276610467876667388753025777789989888742-0352
Q gi|254781167|r  134 VALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLNGGLEDMSQALKILP-SVDG  212 (322)
Q Consensus       134 ~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi~~~~~a~~~l~-~~dg  212 (322)
T Consensus        35 ~dP~~~a~~~~~~ga~~lhiv----DLda~---~---g~~~n~~~I~~i~~~~-~~pi~vGGGIrs~~~~~~~l~~Gadk  103 (233)
T cd04723          35 SDPLDVARAYKELGFRGLYIA----DLDAI---M---GRGDNDEAIRELAAAW-PLGLWVDGGIRSLENAQEWLKRGASR  103 (233)
T ss_pred             CCHHHHHHHHHHCCCCEEEEE----ECCCC---C---CCCCHHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHCCCCE
T ss_conf             799999999998798989999----78654---6---9975399999999878-99889970227699999998607201


Q ss_pred             EEEECCCCCHHHHHHHHHHHH
Q ss_conf             344122000124399999987
Q gi|254781167|r  213 VMIGRAAYKNSAMLTTVDEYF  233 (322)
Q Consensus       213 vMigRga~~~P~if~~I~~~l  233 (322)
T Consensus       104 vvigs~~~~~~~~~~~~~~~g  124 (233)
T cd04723         104 VIVGTETLPSDDDEDRLAALG  124 (233)
T ss_pred             EECCCHHCCCHHHHHHHHHHC
T ss_conf             524510049989999999978