HHsearch alignment for GI: 254781167 and conserved domain: cd04728
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=94.08 E-value=0.24 Score=29.69 Aligned_cols=134 Identities=20% Similarity=0.245 Sum_probs=89.3
Q ss_pred ECCCHHHHHHHHHHHHC-CCCCEEEECC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC
Q ss_conf 26998999998875310-4537774425-641367766688999985589999999998502790699986113456653
Q gi|254781167|r 55 GGADISKLVEAAKIVED-FGYNEINLNV-GCPSARVHEGSFGACLMLNPDIVGDCIAAMCKALSIPVTVKCRIGVDDQIP 132 (322)
Q Consensus 55 ~g~~p~~~~~aa~~~~~-~g~~~idlN~-GCP~~~v~~~g~GaaLl~~p~~~~~iv~~~~~~~~~pvsvK~RlG~~~~~~ 132 (322)
T Consensus 71 Gc~ta~EAvr~A~laRE~~~t~~IKLEVi~D~----------~~LlPD~~eTl~Aae~Lv~~-GF~VlpY~-----~-~- 132 (248)
T cd04728 71 GCRTAEEAVRTARLAREALGTDWIKLEVIGDD----------KTLLPDPIETLKAAEILVKE-GFTVLPYC-----T-D- 132 (248)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC----------CCCCCCHHHHHHHHHHHHHC-CCEEEEEC-----C-C-
T ss_conf 11679999999999999848986999981797----------67798868999999999988-99897867-----8-8-
Q ss_pred CCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH-CCC
Q ss_conf 2201455432000122012100135664025774212276610467876667388753025777789989888742-035
Q gi|254781167|r 133 AVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLNGGLEDMSQALKILP-SVD 211 (322)
Q Consensus 133 ~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi~~~~~a~~~l~-~~d 211 (322)
T Consensus 133 ---D~v~akrLe~~Gc~avMPlgsP-IGSg--------~Gl~n~~~l~~i~e~~-~vPvIVDAGiG~pS~Aa~aMElG~d 199 (248)
T cd04728 133 ---DPVLAKRLEDAGCAAVMPLGSP-IGSG--------QGLLNPYNLRIIIERA-DVPVIVDAGIGTPSDAAQAMELGAD 199 (248)
T ss_pred ---CHHHHHHHHHCCCEEEEECCCC-CCCC--------CCCCCHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHCCCC
T ss_conf ---9999999997495345204564-3479--------8879999999999847-9988984799975678999872655
Q ss_pred CEEEECCC
Q ss_conf 23441220
Q gi|254781167|r 212 GVMIGRAA 219 (322)
Q Consensus 212 gvMigRga 219 (322)
T Consensus 200 aVL~NTAI 207 (248)
T cd04728 200 AVLLNTAI 207 (248)
T ss_pred EEEHHHHH
T ss_conf 33454687