HHsearch alignment for GI: 254781167 and conserved domain: cd04729
>cd04729 NanE N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate. This reaction is part of the pathway that allows the usage of sialic acid as a carbohydrate source. Sialic acids are a family of related sugars that are found as a component of glycoproteins, gangliosides, and other sialoglycoconjugates.
Probab=98.05 E-value=9.1e-05 Score=54.94 Aligned_cols=129 Identities=16% Similarity=0.247 Sum_probs=88.7
Q ss_pred HHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHH
Q ss_conf 9998875310453777442564136776668899998558--99999999985027906999861134566532201455
Q gi|254781167|r 62 LVEAAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNP--DIVGDCIAAMCKALSIPVTVKCRIGVDDQIPAVALRNL 139 (322)
Q Consensus 62 ~~~aa~~~~~~g~~~idlN~GCP~~~v~~~g~GaaLl~~p--~~~~~iv~~~~~~~~~pvsvK~RlG~~~~~~~~~~~~~ 139 (322)
T Consensus 82 ~~ev~~l-~~aGadiIA~DaT~R--------------~RP~g~~l~~~i~~i~~~~~~l~MAD~s-------t----~ee 135 (219)
T cd04729 82 IEEVDAL-AAAGADIIALDATDR--------------PRPDGETLAELIKRIHEEYNCLLMADIS-------T----LEE 135 (219)
T ss_pred HHHHHHH-HHCCCCEEEEECCCC--------------CCCCCCCHHHHHHHHHHHHCCEEEEECC-------C----HHH
T ss_conf 9999999-985999999946788--------------7989978999999999986977887548-------8----999
Q ss_pred HHHHCCCCCCHH--HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH-CCCCEEEE
Q ss_conf 432000122012--100135664025774212276610467876667388753025777789989888742-03523441
Q gi|254781167|r 140 VKSIKKSGVNGI--WIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLNGGLEDMSQALKILP-SVDGVMIG 216 (322)
Q Consensus 140 ~~~~~~~g~~~i--tiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi~~~~~a~~~l~-~~dgvMig 216 (322)
T Consensus 136 ~~~A~~~G~D~vgTTL~GYT-------~~t~~-~~~PD~~lv~~l~~~~-~~pvIaEGri~tPe~a~~a~~~GA~aVVVG 206 (219)
T cd04729 136 ALNAAKLGFDIIGTTLSGYT-------EETAK-TEDPDFELLKELRKAL-GIPVIAEGRINSPEQAAKALELGADAVVVG 206 (219)
T ss_pred HHHHHHCCCCEEECCCCCCC-------CCCCC-CCCCCHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHCCCCEEEEC
T ss_conf 99999849989970214567-------78788-9998789999999975-993997069899999999998399899989
Q ss_pred CCCCCHHHHH
Q ss_conf 2200012439
Q gi|254781167|r 217 RAAYKNSAML 226 (322)
Q Consensus 217 Rga~~~P~if 226 (322)
T Consensus 207 -sAITrP~~I 215 (219)
T cd04729 207 -SAITRPEHI 215 (219)
T ss_pred -CCCCCHHHH
T ss_conf -543888998