HHsearch alignment for GI: 254781167 and conserved domain: cd04731

>cd04731 HisF The cyclase subunit of imidazoleglycerol phosphate synthase (HisF). Imidazole glycerol phosphate synthase (IGPS) catalyzes the fifth step of histidine biosynthesis, the formation of the imidazole ring. IGPS converts N1-(5'-phosphoribulosyl)-formimino-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to imidazole glycerol phosphate (ImGP) and 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR). This conversion involves two tightly coupled reactions in distinct active sites of IGPS. The two catalytic domains can be fused, like in fungi and plants, or peformed by a heterodimer (HisH-glutaminase and HisF-cyclase), like in bacteria.
Probab=98.02  E-value=4.2e-05  Score=57.40  Aligned_cols=168  Identities=14%  Similarity=0.291  Sum_probs=108.3

Q ss_pred             HHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf             98302745784699982699899999887531045377744256413677666889999855899999999985027906
Q gi|254781167|r   39 NILGFSTQEKPLALQIGGADISKLVEAAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKALSIP  118 (322)
Q Consensus        39 ~~~~~~~~e~p~~~Ql~g~~p~~~~~aa~~~~~~g~~~idlN~GCP~~~v~~~g~GaaLl~~p~~~~~iv~~~~~~~~~p  118 (322)
T Consensus        61 ~~i~~i~~~~~~pi~vGGGI-rs~~~~~~~l-~~GadkVvig--------------s~~~~n~~~~~~~~~~~Gs-q~Iv  123 (243)
T cd04731          61 DVVERVAEEVFIPLTVGGGI-RSLEDARRLL-RAGADKVSIN--------------SAAVENPELIREIAKRFGS-QCVV  123 (243)
T ss_pred             HHHHHHHHHCCCCEEEEEEE-EEHHHHHHHH-HCCCCEEEEC--------------CCCCCCCCHHHHHHHHCCC-CCEE
T ss_conf             99999998679868998506-6479999999-7799789989--------------8442377143578875699-3099


Q ss_pred             EEEEEE-----------CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf             999861-----------134566532201455432000122012100135664025774212276610467876667388
Q gi|254781167|r  119 VTVKCR-----------IGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENP  187 (322)
Q Consensus       119 vsvK~R-----------lG~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~  187 (322)
T Consensus       124 ~siD~k~~~~~~~~v~~~~~~~-~~~~~~~~~i~~~~~~G~geil~tdI~--------~DGt~~G-~d~~l~~~i~~~~-  192 (243)
T cd04731         124 VSIDAKRRGDGGYEVYTHGGRK-PTGLDAVEWAKEVEELGAGEILLTSMD--------RDGTKKG-YDLELIRAVSSAV-  192 (243)
T ss_pred             EEEEEEECCCCCEEEEECCCCC-CCHHHHHHHHHHHHHCCCCEEEEEEEC--------CCCCCCC-CCHHHHHHHHHHC-
T ss_conf             9999765378962898469844-126789999999984698789998725--------7685665-7999999999868-


Q ss_pred             CCCCCCCCCCCCHHHHHHHH--HCCCCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf             75302577778998988874--203523441220001243999999871
Q gi|254781167|r  188 DLFIGLNGGLEDMSQALKIL--PSVDGVMIGRAAYKNSAMLTTVDEYFS  234 (322)
Q Consensus       188 ~~~i~~NGdi~~~~~a~~~l--~~~dgvMigRga~~~P~if~~I~~~l~  234 (322)
T Consensus       193 ~~piI~sGGi~~~~di~~~l~~~~~~gv~~g~~~~~~~~~l~~~k~~L~  241 (243)
T cd04731         193 NIPVIASGGAGKPEHFVEAFEEGGADAALAASIFHFGEYTIAELKEYLA  241 (243)
T ss_pred             CCCEEEECCCCCHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHHHHHHHH
T ss_conf             9999998899999999999987898299882276769989999999986