HHsearch alignment for GI: 254781167 and conserved domain: cd04733

>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=99.15  E-value=1.1e-10  Score=98.53  Aligned_cols=226  Identities=15%  Similarity=0.238  Sum_probs=146.4

Q ss_pred             CCCHHHHHHHH-HHCCCEEEECCCCCCHH--H----------HCCCH-----HHHH-HCCCCCCCEEEEEE--CC-----
Q ss_conf             86078999999-82898299817033247--7----------60897-----8983-02745784699982--69-----
Q gi|254781167|r    4 WTDRHYRFFAR-LLTNNALLYTEMIVADA--I----------LRGDK-----KNIL-GFSTQEKPLALQIG--GA-----   57 (322)
Q Consensus         4 ~Td~~fR~l~r-~~~~~~~~~TEmi~a~~--l----------~~~~~-----~~~~-~~~~~e~p~~~Ql~--g~-----   57 (322)
T Consensus        33 ~t~~~~~yy~~rA~gG~glIit~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~k~l~d~vh~~g~~i~~QL~H~Gr~~~~~  112 (338)
T cd04733          33 PTPELIRLYRRWAEGGIGLIITGNVMVDPRHLEEPGIIGNVVLESGEDLEAFREWAAAAKANGALIWAQLNHPGRQSPAG  112 (338)
T ss_pred             CCHHHHHHHHHHHCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
T ss_conf             99999999998862783488970389867767799988888879999999999999999856986999515654124500


Q ss_pred             ----------------------C------------HHHHHHHHHHHHCCCCCEEEECCCC-------CHHHHH--HHHHH
Q ss_conf             ----------------------9------------8999998875310453777442564-------136776--66889
Q gi|254781167|r   58 ----------------------D------------ISKLVEAAKIVEDFGYNEINLNVGC-------PSARVH--EGSFG   94 (322)
Q Consensus        58 ----------------------~------------p~~~~~aa~~~~~~g~~~idlN~GC-------P~~~v~--~~g~G   94 (322)
T Consensus       113 ~~~~~~~~s~~~~~~~~~~~~~~p~~mt~~eI~~ii~~f~~AA~rA~~AGfDgVEiH~ahGYLl~qFlS~~~N~RtDeYG  192 (338)
T cd04733         113 LNQNPVAPSVALDPGGLGKLFGKPRAMTEEEIEDVIDRFAHAARLAQEAGFDGVQIHAAHGYLLSQFLSPLTNKRTDEYG  192 (338)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCC
T ss_conf             07898887655676655557898864899999999999999999999839998998236554899862987689968579


Q ss_pred             HHHHHHHHHHHHHHHHHHCCC--CEEEEEEEEC--CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHC-CCCCCCC
Q ss_conf             999855899999999985027--9069998611--3456653220145543200012201210013566402-5774212
Q gi|254781167|r   95 ACLMLNPDIVGDCIAAMCKAL--SIPVTVKCRI--GVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKG-LSPKDNR  169 (322)
Q Consensus        95 aaLl~~p~~~~~iv~~~~~~~--~~pvsvK~Rl--G~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g-~s~~~~~  169 (322)
T Consensus       193 GS~ENR~Rf~lEii~avr~~vg~d~~v~~Ris~~d~~~~G~~~~d~~~~~~~l~~~GvD~i~vs~G~~~~~~~~~~~~~~  272 (338)
T cd04733         193 GSLENRARLLLEIYDAIRAAVGPGFPVGIKLNSADFQRGGFTEEDALEVVEALEEAGVDLVELSGGTYESPAMAGAKKES  272 (338)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC
T ss_conf             89889988999999999997199886999845354247999989999999999876998899468854573224776544


Q ss_pred             CCC--CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH--CCCCEEEECCCCCHHHHHHHHH
Q ss_conf             276--610467876667388753025777789989888742--0352344122000124399999
Q gi|254781167|r  170 KIP--NLDYDIVYEIKKENPDLFIGLNGGLEDMSQALKILP--SVDGVMIGRAAYKNSAMLTTVD  230 (322)
Q Consensus       170 ~~~--~~~~~~i~~l~~~~~~~~i~~NGdi~~~~~a~~~l~--~~dgvMigRga~~~P~if~~I~  230 (322)
T Consensus       273 ~~~~~~~~~~~a~~ik~~~-~~Pvi~~G~i~~~~~ae~~l~~g~~DlV~~gR~~iadPdl~~k~~  336 (338)
T cd04733         273 TIAREAYFLEFAEKIRKVT-KTPLMVTGGFRTRAAMEQALASGAVDGIGLARPLALEPDLPNKLL  336 (338)
T ss_pred             CCCCCCCHHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHH
T ss_conf             4567510599999999984-997999899899999999998799510898899997905999986