HHsearch alignment for GI: 254781167 and conserved domain: cd04734
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase. One member of this subgroup, the Sinorhizobium meliloti stachydrine utilization protein stcD, has been idenified as a putative N-methylproline demethylase.
Probab=99.08 E-value=2.8e-10 Score=95.60 Aligned_cols=226 Identities=16% Similarity=0.183 Sum_probs=146.2
Q ss_pred CCCHHHHHHHH-HHCCCEEEECCCCCC--HHHHCCC------H------HHHH-HCCCCCCCEEEEEECC----------
Q ss_conf 86078999999-828982998170332--4776089------7------8983-0274578469998269----------
Q gi|254781167|r 4 WTDRHYRFFAR-LLTNNALLYTEMIVA--DAILRGD------K------KNIL-GFSTQEKPLALQIGGA---------- 57 (322)
Q Consensus 4 ~Td~~fR~l~r-~~~~~~~~~TEmi~a--~~l~~~~------~------~~~~-~~~~~e~p~~~Ql~g~---------- 57 (322)
T Consensus 31 ~~~~~~~~y~~rA~gG~GlIi~~~~~v~~~~~~~~~~~~i~~d~~i~~~k~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~ 110 (343)
T cd04734 31 PSERYIAYHEERARGGAGLIITEGSSVHPSDSPAFGNLNASDDEIIPGFRRLAEAVHAHGAVIMIQLTHLGRRGDGDGSW 110 (343)
T ss_pred CCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC
T ss_conf 99999999999967898379970067646556899987668999999999999999735881898711577666766799
Q ss_pred ----------------C------------HHHHHHHHHHHHCCCCCEEEECCCC---------CHHHHHHHHHHHHHHHH
Q ss_conf ----------------9------------8999998875310453777442564---------13677666889999855
Q gi|254781167|r 58 ----------------D------------ISKLVEAAKIVEDFGYNEINLNVGC---------PSARVHEGSFGACLMLN 100 (322)
Q Consensus 58 ----------------~------------p~~~~~aa~~~~~~g~~~idlN~GC---------P~~~v~~~g~GaaLl~~ 100 (322)
T Consensus 111 ~~~~~pS~~~~~~~~~~p~~mt~eeI~~ii~~f~~AA~~A~~AGfDgVEIH~ahGYLl~qFlSp~~N~RtDeYGGs~eNR 190 (343)
T cd04734 111 LPPLAPSAVPEPRHRAVPKAMEEEDIEEIIAAFADAARRCQAGGLDGVELQAAHGHLIDQFLSPLTNRRTDEYGGSLENR 190 (343)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCCCCCCCCCCCCCHHHH
T ss_conf 86268888866567987944899999999999999999999739988984457774699846985589967679888999
Q ss_pred HHHHHHHHHHHHCCC--CEEEEEEEECCCCC---CCCCCCHHHHHHHHCCCC-CCHHHHHHHHHHH-HCCCC-CCCCCCC
Q ss_conf 899999999985027--90699986113456---653220145543200012-2012100135664-02577-4212276
Q gi|254781167|r 101 PDIVGDCIAAMCKAL--SIPVTVKCRIGVDD---QIPAVALRNLVKSIKKSG-VNGIWIHARKAIL-KGLSP-KDNRKIP 172 (322)
Q Consensus 101 p~~~~~iv~~~~~~~--~~pvsvK~RlG~~~---~~~~~~~~~~~~~~~~~g-~~~itiH~Rt~~~-~g~s~-~~~~~~~ 172 (322)
T Consensus 191 ~Rf~~EIi~~Ir~~vg~~f~i~~Ris~-~~~~~~g~~~~e~~~~~~~l~~~G~vD~l~vs~g~~~~~~~~~~~~p~~~~~ 269 (343)
T cd04734 191 MRFLLEVLAAVRAAVGPDFIVGIRISG-DEDTEGGLSPDEALEIAARLAAEGLIDYVNVSAGSYYTLLGLAHVVPSMGMP 269 (343)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEECC-CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHCCCCCCCC
T ss_conf 899999999999981987761588676-2356898998999999999996699768996567543322211006876677
Q ss_pred CC-HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH--CCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 61-0467876667388753025777789989888742--03523441220001243999999
Q gi|254781167|r 173 NL-DYDIVYEIKKENPDLFIGLNGGLEDMSQALKILP--SVDGVMIGRAAYKNSAMLTTVDE 231 (322)
Q Consensus 173 ~~-~~~~i~~l~~~~~~~~i~~NGdi~~~~~a~~~l~--~~dgvMigRga~~~P~if~~I~~ 231 (322)
T Consensus 270 ~g~~~~~a~~ik~~~-~~pvi~~G~i~~~~~ae~~l~~g~~D~V~~gR~~ladPd~v~k~~~ 330 (343)
T cd04734 270 PGPFLPLAARIKQAV-DLPVFHAGRIRDPAEAEQALAAGHADMVGMTRAHIADPHLVAKARE 330 (343)
T ss_pred CCCCHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHHC
T ss_conf 643488999999972-9859997998999999999987996216978999978119999976