HHsearch alignment for GI: 254781167 and conserved domain: pfam00218
>pfam00218 IGPS Indole-3-glycerol phosphate synthase.
Probab=96.16 E-value=0.062 Score=34.06 Aligned_cols=148 Identities=14% Similarity=0.211 Sum_probs=91.8
Q ss_pred EEECCCHHHHHHHHHHHH-C-CCCC-EEEECCCCCHHHHHHHHHHHH--HH----HHHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 982699899999887531-0-4537-774425641367766688999--98----5589999999998502790699986
Q gi|254781167|r 53 QIGGADISKLVEAAKIVE-D-FGYN-EINLNVGCPSARVHEGSFGAC--LM----LNPDIVGDCIAAMCKALSIPVTVKC 123 (322)
Q Consensus 53 Ql~g~~p~~~~~aa~~~~-~-~g~~-~idlN~GCP~~~v~~~g~Gaa--Ll----~~p~~~~~iv~~~~~~~~~pvsvK~ 123 (322)
T Consensus 92 ~~F~Gs~~~L~~vr~~v~lPiLrKDFIid-----~yQI~ear~~GADaiLLI~~~L~~~~l~~l~~~a~~-lgl~~LvEv 165 (254)
T pfam00218 92 KYFQGSLEYLREVREAVSLPVLRKDFIID-----EYQIYEARAYGADTVLLIVAVLSDELLEELYEYARS-LGMEPLVEV 165 (254)
T ss_pred CCCCCCHHHHHHHHHHCCCCEECCHHEEE-----HHHHHHHHHCCCCEEEHHHHCCCHHHHHHHHHHHHH-HCCEEEEEE
T ss_conf 86798799999999864885111410465-----999999998088863144711999999999999998-488679886
Q ss_pred ECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC-CCCCCCCCCCCCHHH
Q ss_conf 1134566532201455432000122012100135664025774212276610467876667388-753025777789989
Q gi|254781167|r 124 RIGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENP-DLFIGLNGGLEDMSQ 202 (322)
Q Consensus 124 RlG~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~-~~~i~~NGdi~~~~~ 202 (322)
T Consensus 166 h-------~~~---El-~~al~~~a~iIGINNRn-----------L~tf~vd~~~t~~L~~~ip~~~~~VsESGI~~~~d 223 (254)
T pfam00218 166 H-------NEE---EL-ERALALGAKLIGVNNRN-----------LKTFEVDLNTTRRLAPMVPEDVLLVAESGISTPED 223 (254)
T ss_pred C-------CHH---HH-HHHHHCCCCEEEECCCC-----------HHHHHCCHHHHHHHHHHCCCCCEEEECCCCCCHHH
T ss_conf 8-------999---99-99984899789632788-----------46510057999999955898987998389999999
Q ss_pred HHHHHH-CCCCEEEECCCCCHHHHHHH
Q ss_conf 888742-03523441220001243999
Q gi|254781167|r 203 ALKILP-SVDGVMIGRAAYKNSAMLTT 228 (322)
Q Consensus 203 a~~~l~-~~dgvMigRga~~~P~if~~ 228 (322)
T Consensus 224 i~~l~~~G~~~~LIGe~lm~~~dp~~~ 250 (254)
T pfam00218 224 VEKLAKHGANAFLVGESLMRAPDVRAA 250 (254)
T ss_pred HHHHHHCCCCEEEECHHHHCCCCHHHH
T ss_conf 999998799999989687579998999