RPSBLAST alignment for GI: 254781167 and conserved domain: TIGR00737

>gnl|CDD|129820 TIGR00737, nifR3_yhdG, putative TIM-barrel protein, nifR3 family. Members of this family show a distant relationship to alpha/beta (TIM) barrel enzymes such as dihydroorotate dehydrogenase and glycolate oxidase. Length = 319

 Score =  122 bits (307), Expect = 2e-28
 Identities = 81/302 (26%), Positives = 138/302 (45%), Gaps = 29/302 (9%)

Query: 1   MVDWTDRHYRFFARLLTNNALLYTEMIVADAILRGDKKN--ILGFSTQEKPLALQIGGAD 58
           M   TD  +R          L   EM+ ++AI+   ++   +L  +  E P+++Q+ G+D
Sbjct: 15  MAGVTDSPFRRLVAEY-GAGLTVCEMVSSEAIVYDSQRTMRLLDIAEDETPISVQLFGSD 73

Query: 59  ISKLVEAAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKALSIP 118
              + EAAKI E+ G + I++N+GCP  ++ +   G+ L+ +PD++G  + A+  A+ IP
Sbjct: 74  PDTMAEAAKINEELGADIIDINMGCPVPKITKKGAGSALLRDPDLIGKIVKAVVDAVDIP 133

Query: 119 VTVKCRIGVDDQIPAVALRN---LVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLD 175
           VTVK RIG DD     A  N     +  + +G   + +H R    +G S + N       
Sbjct: 134 VTVKIRIGWDD-----AHINAVEAARIAEDAGAQAVTLHGRTRA-QGYSGEAN------- 180

Query: 176 YDIVYEIKKENPDLFIGLNGGLEDMSQALKILPS--VDGVMIGRAAYKNSAMLTTVDEYF 233
           +DI+  +K+      IG NG +     A  +L +   DGVMIGR A  N  +   +++Y 
Sbjct: 181 WDIIARVKQAVRIPVIG-NGDIFSPEDAKAMLETTGCDGVMIGRGALGNPWLFRQIEQYL 239

Query: 234 -SNPLTGSSPIKTRVDKDFWRKISASMTDYAARHLHSGGKLQQITRHMIGLFHGFPNSRR 292
            +           ++D    R +      Y          L+   +H+     GFP +  
Sbjct: 240 TTGKYKPPPTFAEKLDA-ILRHLQLLADYYGESKG-----LRIARKHIAWYLKGFPGNAA 293

Query: 293 CR 294
            R
Sbjct: 294 LR 295