RPSBLAST alignment for GI: 254781167 and conserved domain: TIGR01037

>gnl|CDD|130109 TIGR01037, pyrD_sub1_fam, dihydroorotate dehydrogenase (subfamily 1) family protein. This family includes subfamily 1 dihydroorotate dehydrogenases while excluding the closely related subfamily 2 (TIGR01036). This family also includes a number of uncharacterized proteins and a domain of dihydropyrimidine dehydrogenase. The uncharacterized proteins might all be dihydroorotate dehydrogenase. Length = 300

 Score = 44.7 bits (106), Expect = 3e-05
 Identities = 44/190 (23%), Positives = 76/190 (40%), Gaps = 32/190 (16%)

Query: 49  PLALQIGGADISKLVEAAKIVEDFG--YNEINLNVGCPSARVHEGSFGACLMLNPDIVGD 106
           PL   + G+ + +  E A+ +E      +   LN+ CP  +    + G     +P++  D
Sbjct: 92  PLIASVYGSSVEEFAEVAEKLEKAPPYVDAYELNLSCPHVKGGGIAIG----QDPELSAD 147

Query: 107 CIAAMCKALSIPVTVKCRIGVDDQIPAVALRNLVKSIKKSGVNG-----------IWIHA 155
            + A+     +PV  K    V D         + K+ +++G +G           I I  
Sbjct: 148 VVKAVKDKTDVPVFAKLSPNVTDIT------EIAKAAEEAGADGLTLINTLRGMKIDIKT 201

Query: 156 RKAILK----GLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLNGGLEDMSQALK-ILPSV 210
            K IL     GLS      I  +   +VY++ K      IG+ GG+     AL+ ++   
Sbjct: 202 GKPILANKTGGLSGP---AIKPIALRMVYDVYKMVDIPIIGV-GGITSFEDALEFLMAGA 257

Query: 211 DGVMIGRAAY 220
             V +G A Y
Sbjct: 258 SAVQVGTAVY 267