RPSBLAST alignment for GI: 254781167 and conserved domain: COG0042

>gnl|CDD|30391 COG0042, COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]. Length = 323

 Score =  233 bits (595), Expect = 6e-62
 Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 27/304 (8%)

Query: 1   MVDWTDRHYRFFARLLTNNALLYTEMIVADAILRGDKKNILGFSTQ--EKPLALQIGGAD 58
           M   TD  +R  AR L    LLYTEM+ A A+L G KK +L       E+P+A+Q+GG+D
Sbjct: 18  MAGVTDLPFRRLARELGAYDLLYTEMVSAKALLHGRKKFLLLLDELEEERPVAVQLGGSD 77

Query: 59  ISKLVEAAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKAL-SI 117
              L EAAKI E+ G + I+LN GCPS +V +G  GA L+ NP+++ + + AM +A+  I
Sbjct: 78  PELLAEAAKIAEELGADIIDLNCGCPSPKVVKGGAGAALLKNPELLAEIVKAMVEAVGDI 137

Query: 118 PVTVKCRIGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYD 177
           PVTVK R+G DD    +    + + ++ +G + + +H R      L P         D+D
Sbjct: 138 PVTVKIRLGWDD--DDILALEIARILEDAGADALTVHGRTRAQGYLGP--------ADWD 187

Query: 178 IVYEIKKENPDLFIGLNGGLEDMSQALKIL--PSVDGVMIGRAAYKNSAMLTTVDEYFSN 235
            + E+K+  P + +  NG ++ +  A ++L     DGVMIGR A  N  +   +D   + 
Sbjct: 188 YIKELKEAVPSIPVIANGDIKSLEDAKEMLEYTGADGVMIGRGALGNPWLFRQIDYLETG 247

Query: 236 PLTGSSPIKTRVDKDFWRKISASMTDYAARHLHSGGK--LQQITRHMIGLFHGFPNSRRC 293
                      +      ++   + ++    L   GK  L+++ +H+     G P +R  
Sbjct: 248 E----------LLPPTLAEVLDILREHLELLLEYYGKKGLRRLRKHLGYYLKGLPGAREL 297

Query: 294 RHIL 297
           R  L
Sbjct: 298 RRAL 301