RPSBLAST alignment for GI: 254781167 and conserved domain: KOG2335
>gnl|CDD|37546 KOG2335, KOG2335, KOG2335, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]. Length = 358
Score = 178 bits (454), Expect = 1e-45
Identities = 74/236 (31%), Positives = 122/236 (51%), Gaps = 16/236 (6%)
Query: 1 MVDWTDRHYRFFARLLTNNALLYTEMIVADAILRGDKKNILGFST--QEKPLALQIGGAD 58
MVD+++ +R RL LLYT MI A + +K ST +++PL +Q GG D
Sbjct: 26 MVDYSELAFRRLVRL-YGADLLYTPMIHAKTFVHSEKYRDSELSTSPEDRPLIVQFGGND 84
Query: 59 ISKLVEAAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKALSIP 118
L++AA++V+ + + I+LN GCP G +GA LM NP++VG+ ++A+ L++P
Sbjct: 85 PENLLKAARLVQPYC-DGIDLNCGCPQKVAKRGGYGAFLMDNPELVGEMVSAVRANLNVP 143
Query: 119 VTVKCRIGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDI 178
V+VK RI VD + + K ++ +GV+ + +H R KGL K D++
Sbjct: 144 VSVKIRIFVDLE----KTVDYAKMLEDAGVSLLTVHGRTREQKGL------KTGPADWEA 193
Query: 179 VYEIKKENPDLFIGLNGGLEDMSQALKILPS--VDGVMIGRAAYKNSAMLTTVDEY 232
+ +++ PD+ + NG + + + L DGVM R N A+ T
Sbjct: 194 IKAVRENVPDIPVIANGNILSLEDVERCLKYTGADGVMSARGLLYNPALFLTAGYG 249