RPSBLAST alignment for GI: 254781167 and conserved domain: KOG2335

>gnl|CDD|37546 KOG2335, KOG2335, KOG2335, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]. Length = 358
 Score =  178 bits (454), Expect = 1e-45
 Identities = 74/236 (31%), Positives = 122/236 (51%), Gaps = 16/236 (6%)

Query: 1   MVDWTDRHYRFFARLLTNNALLYTEMIVADAILRGDKKNILGFST--QEKPLALQIGGAD 58
           MVD+++  +R   RL     LLYT MI A   +  +K      ST  +++PL +Q GG D
Sbjct: 26  MVDYSELAFRRLVRL-YGADLLYTPMIHAKTFVHSEKYRDSELSTSPEDRPLIVQFGGND 84

Query: 59  ISKLVEAAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKALSIP 118
              L++AA++V+ +  + I+LN GCP      G +GA LM NP++VG+ ++A+   L++P
Sbjct: 85  PENLLKAARLVQPYC-DGIDLNCGCPQKVAKRGGYGAFLMDNPELVGEMVSAVRANLNVP 143

Query: 119 VTVKCRIGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDI 178
           V+VK RI VD +       +  K ++ +GV+ + +H R    KGL      K    D++ 
Sbjct: 144 VSVKIRIFVDLE----KTVDYAKMLEDAGVSLLTVHGRTREQKGL------KTGPADWEA 193

Query: 179 VYEIKKENPDLFIGLNGGLEDMSQALKILPS--VDGVMIGRAAYKNSAMLTTVDEY 232
           +  +++  PD+ +  NG +  +    + L     DGVM  R    N A+  T    
Sbjct: 194 IKAVRENVPDIPVIANGNILSLEDVERCLKYTGADGVMSARGLLYNPALFLTAGYG 249