HHsearch alignment for GI: 254781170 and conserved domain: PRK10674

>PRK10674 deoxyribodipyrimidine photolyase; Provisional.
Probab=100.00  E-value=0  Score=1121.27  Aligned_cols=471  Identities=55%  Similarity=1.024  Sum_probs=429.9

Q ss_pred             CCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             64268883586755677899999995798299999738378478889989999999999999999997598099996575
Q gi|254781170|r    7 MSVHLVWLRNDLRITDNKALYAACHNSDAKVIAVFIATPEQWRQHGISARQSHFIYASLLQVQKSLSQKGIVFQYHQCSN   86 (483)
Q Consensus         7 M~~~IvWfRrDLRl~DN~aL~~A~~~~~~~vlpvyi~dp~~~~~~~~~~~~~~Fl~esL~~L~~~L~~~g~~L~v~~~~~   86 (483)
T Consensus         1 M~~~ivWFRrDLRl~DN~aL~~A~~~~~~~vlpvyi~dp~~~~~~~~~~~~~~Fl~esL~~L~~~L~~~g~~L~i~~~~~   80 (472)
T PRK10674          1 MTTHLVWFRNDLRLHDNLALAAACRDPSARVLALYIATPAQWAAHNMAPRQAAFINAQLNALQIALAEKGIPLLFHEVDD   80 (472)
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             97079996999756178999999977999699999985666406897999999999999999999997799779997676


Q ss_pred             CCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             35089999999987097614210011100110010268887520000002234345557600237864432101479988
Q gi|254781170|r   87 FDDSIEWLDSYCLQQRVTKLFYNRQYEINEVRRDKLLEKRLQHRVICKSFDDSVLLPPGSILNHALQMYKVYTPFRKALI  166 (483)
Q Consensus        87 ~g~~~~~L~~l~~~~~i~~v~~n~~~~~~~~~rd~~i~~~l~~~~~~~~~~~~~l~~p~~i~~~~~~~~~vftpf~k~~~  166 (483)
T Consensus        81 ~~~~~~~l~~l~~~~~i~~v~~n~~~~~~~~~RD~~i~~~~~-~i~~~~~~~~~l~~p~~v~~~~~~~ykvfTpf~k~~~  159 (472)
T PRK10674         81 FAASVEWVKQVCQQHQVTHLFYNYQYEVNERQRDVAVERTLR-NVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAFL  159 (472)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCC-CCEEEEECCCEEECCCCEECCCCCCCCCCCHHHHHHH
T ss_conf             546899999999980997899836457518999999998755-9828997581874655016799996764877889999


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC
Q ss_conf             631566322124554456776675557532347643-4554688876433322111111101101202686545666544
Q gi|254781170|r  167 QNLVQADLRSLPVPAIRLTGPVTPSNIPRFFDYPFQ-AIDPMFPIGEQNALHILRKFCKEKVYYYVEQRDIPAIQGTSQL  245 (483)
Q Consensus       167 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~gGe~~A~~~L~~Fl~~~l~~Y~~~Rn~p~~~~tSrL  245 (483)
T Consensus       160 ~~~~~~~p~~~p~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gGE~~A~~~L~~Fl~~~~~~Y~~~Rn~P~~~~tSrL  238 (472)
T PRK10674        160 KRLREGDPECVPAPKVRSSGAIEPLPPIP-LNYPQQSFDTALFPVEEKAAIAQLRQFCQEGAGEYEQQRDFPAVEGTSRL  238 (472)
T ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf             87321276558897644456789988533-37987776313579559999999999997247652411588676676656


Q ss_pred             CHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHCCHHHHHH
Q ss_conf             61111464879999999999864311123477200102320246888788863357888615301101200010467899
Q gi|254781170|r  246 SPYLSIGVLSPRQCWNRLKEEFVDLLIKPKSGAFSWLNELIWREFYRHLMAFYPSVCMGKPFIPWTEKIEWNKDSHLLQA  325 (483)
Q Consensus       246 SPyL~~G~IS~R~v~~~~~~~~~~~~~~~~~~~~~fl~eL~WRef~~~~~~~~P~~~~~~~~~~~~~~~~w~~~~~~~~a  325 (483)
T Consensus       239 SPyL~fG~IS~R~v~~~~~~~~~~~~--~~~~~~~~~~eL~WRef~~~~l~~~P~~~~~~~~~~~~~~~~w~~~~~~f~a  316 (472)
T PRK10674        239 SASLATGGLSPRQCLHRLLAEQPQAL--DGGAGSVWLNELIWREFYRHLMTAYPSLCKHRPFIAWTDRVQWQSNPAHLQA  316 (472)
T ss_pred             CHHHHCCCCCHHHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHCCCCCCCHHHHHH
T ss_conf             89982963569999999999867520--2675288988889999999999978466542534155652776579899998


Q ss_pred             HHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHCCCCCCCEEEECCCCCCCC
Q ss_conf             87227888688999999997167635899999999998410470022334776641331114745610020127898470
Q gi|254781170|r  326 WKQGYTGFPIIDAAMRQLNTIGWMHNRLRMITASFLVKDLLVDWRIGEEYFMSQLLDGDLASNNGGWQWAASTGNDSVPY  405 (483)
Q Consensus       326 W~~G~TG~PlVDA~MR~L~~tG~mhnr~Rm~vaSfl~~~L~idWr~g~~~f~~~llD~d~~~n~~~wq~~a~~G~d~~~~  405 (483)
T Consensus       317 W~~G~TG~P~VDA~MR~L~~tGwm~nR~R~~vaSFl~~~L~idWr~g~~~f~~~l~D~d~~~n~~~Wqw~a~~G~d~~~~  396 (472)
T PRK10674        317 WQQGKTGYPIVDAAMRQLNSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPY  396 (472)
T ss_pred             HHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCC
T ss_conf             74799999627599999999769788999999999998649992778999999852257345873341112567888885


Q ss_pred             CCCCCHHHHHHHHCCCCCEEHCCCHHHHCCCHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             2204645898872489978330082432799778049554013125789999763189999999999999996400
Q gi|254781170|r  406 FRIFNPTIQGKRFDPQGTFIRHWLPELNNVPTQYIHAPHSWLDKNDLSLNYPLPIVDHKKACHHTLNQYYAAKKQS  481 (483)
Q Consensus       406 ~Ri~np~~q~~~~Dp~g~~ir~wvPeL~~~p~~~ih~p~~~~~~~~~~~~YP~pivd~~~~~~~a~~~~~~~~k~~  481 (483)
T Consensus       397 ~Ri~nP~~q~~~~Dp~g~fir~wvPEL~~~p~~~ih~Pw~~~~~~~~~~~YP~piVd~~~ar~~a~~~~~~~~k~~  472 (472)
T PRK10674        397 FRIFNPTTQGERFDRDGEFIRRWLPELRDVPGKAIHEPWRWAEKAGVTLDYPQPIVDHKQARLATLAAYEAARKGA  472 (472)
T ss_pred             CEEECHHHHHHHHCCCCCCHHHHCHHHHCCCHHHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf             2155787889985989876467386531699888349300764237678998565878999999999999986559