HHsearch alignment of GI: 254781170 and MMDB domain: 1dnp_A_264-426
>1dnp_A (A:264-426) DNA photolyase; DNA repair, electron transfer, excitation energy transfer, carbon-carbon; HET: DNA FAD MHF; 2.30A {Escherichia coli}
Probab=100.00 E-value=0 Score=411.37 Aligned_cols=162 Identities=70% Similarity=1.368 Sum_probs=156.9
Q ss_pred CCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHH
Q ss_conf 47720010232024688878886335788861530110120001046789987227888688999999997167635899
Q gi|254781170|r 275 KSGAFSWLNELIWREFYRHLMAFYPSVCMGKPFIPWTEKIEWNKDSHLLQAWKQGYTGFPIIDAAMRQLNTIGWMHNRLR 354 (483)
Q Consensus 275 ~~~~~~fl~eL~WRef~~~~~~~~P~~~~~~~~~~~~~~~~w~~~~~~~~aW~~G~TG~PlVDA~MR~L~~tG~mhnr~R 354 (483)
++++++|++||+||||++++++++|...............+|+.+++.+++|++|+||+|+||||||||++||||||++|
T Consensus 2 ~~~~e~f~~~L~wRe~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~w~~G~Tg~p~iDA~mr~L~~tG~lhn~~R 81 (163)
T 1dnp_A 2 GGAGSVWLNELIWREFYRHLITYHPSLCKHRPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLR 81 (163)
T ss_dssp TSTTHHHHHHHHHHHHHHHHHHHCGGGGGTCCSSGGGGGSCCCCCHHHHHHHHHTCSSCHHHHHHHHHHHHHSCCCHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHH
T ss_conf 45413555479888999998874273121143100223200147878887541487897489999998644575006799
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEHCCCHHHHC
Q ss_conf 99999999841047002233477664133111474561002012789847022046458988724899783300824327
Q gi|254781170|r 355 MITASFLVKDLLVDWRIGEEYFMSQLLDGDLASNNGGWQWAASTGNDSVPYFRIFNPTIQGKRFDPQGTFIRHWLPELNN 434 (483)
Q Consensus 355 m~vaSfl~~~L~idWr~g~~~f~~~llD~d~~~n~~~wq~~a~~G~d~~~~~Ri~np~~q~~~~Dp~g~~ir~wvPeL~~ 434 (483)
|+||||||+.|++||+.|++||+++|||+|+|+|++||||+||+|+|+.|++|+|||++|+++|||+|+|||||||||++
T Consensus 82 ~~va~fl~~~l~~~w~~ga~~f~~~liD~d~a~n~~~wq~~~G~~~~~~~~~r~~n~~~~~~~~d~~g~yirr~~pel~~ 161 (163)
T 1dnp_A 82 MITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDHEGEFIRQWLPELRD 161 (163)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHHHTTCTTCCHHHHHHHHHHHTTCSTTCCCTTCCCCHHHHHHHHTTTCHHHHHHCGGGTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHCHHHHC
T ss_conf 99999999852534655399999761168712175877877364888998654168989999869798757773866307
Q ss_pred CC
Q ss_conf 99
Q gi|254781170|r 435 VP 436 (483)
Q Consensus 435 ~p 436 (483)
+|
T Consensus 162 ~P 163 (163)
T 1dnp_A 162 VP 163 (163)
T ss_dssp SC
T ss_pred CC
T ss_conf 99