HHsearch results for GI: 254781170 and protein with PDBid: 2wq7_A
>2wq7_A RE11660P; lyase-DNA complex, DNA repair, DNA lesion, lyase; HET: TDY Z FAD; 2.00A {Drosophila melanogaster} PDB: 2wb2_A* 2wq6_A* 3cvu_A* 3cvv_A* 3cvy_A* 3cvw_A* 3cvx_A*
Probab=100.00 E-value=0 Score=1012.31 Aligned_cols=466 Identities=28% Similarity=0.441 Sum_probs=403.1
Q ss_pred CEEEEEECCCCCCCCCHHHHHHHHHCC-----CCEEEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 426888358675567789999999579-----829999973837847888998999999999999999999759809999
Q gi|254781170|r 8 SVHLVWLRNDLRITDNKALYAACHNSD-----AKVIAVFIATPEQWRQHGISARQSHFIYASLLQVQKSLSQKGIVFQYH 82 (483)
Q Consensus 8 ~~~IvWfRrDLRl~DN~aL~~A~~~~~-----~~vlpvyi~dp~~~~~~~~~~~~~~Fl~esL~~L~~~L~~~g~~L~v~ 82 (483)
++.||||||||||+||+||.+|++.++ .+|+||||+||.+++.+..|.+|++||++||.+|+++|+++|++|+|+
T Consensus 29 ~~vi~WFRrDLRl~DN~AL~~A~~~a~~~~~~~~V~pvfi~dp~~~~~~~~~~~r~~Fl~esL~~L~~~L~~lg~~L~v~ 108 (543)
T 2wq7_A 29 STLVHWFRKGLRLHDNPALSHIFTAANAAPGRYFVRPIFILDPGILDWMQVGANRWRFLQQTLEDLDNQLRKLNSRLFVV 108 (543)
T ss_dssp EEEEEEESSCCCSTTCHHHHHHHHHHHHSTTTEEEEEEEEECTTGGGCTTSCHHHHHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 87898889995363549999999860201589729999998915435799789999999999999999999779977999
Q ss_pred ECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCHHHHHHHH-HCCCCEECCCCCCCCCCCCCC-CCCCCCCCCHH
Q ss_conf 6575350899999999870976142100111001100102688875-200000022343455576002-37864432101
Q gi|254781170|r 83 QCSNFDDSIEWLDSYCLQQRVTKLFYNRQYEINEVRRDKLLEKRLQ-HRVICKSFDDSVLLPPGSILN-HALQMYKVYTP 160 (483)
Q Consensus 83 ~~~~~g~~~~~L~~l~~~~~i~~v~~n~~~~~~~~~rd~~i~~~l~-~~~~~~~~~~~~l~~p~~i~~-~~~~~~~vftp 160 (483)
. |++.++|.+|+++++|+.||+|++|++++++||+.|++.|+ .++.+.++++++|++|+.+.+ ..+.++.+|++
T Consensus 109 ~----G~~~~~l~~L~~~~~i~~V~~n~~~~~~~~~rD~~v~~~l~~~~i~~~~~~~~~l~~p~~~~~k~~~~~~~~~~~ 184 (543)
T 2wq7_A 109 R----GKPAEVFPRIFKSWRVEMLTFETDIEPYSVTRDAAVQKLAKAEGVRVETHCSHTIYNPELVIAKNLGKAPITYQK 184 (543)
T ss_dssp E----SCHHHHHHHHHHHTTEEEEEEECCCSHHHHHHHHHHHHHHHHHTCEEEEECCSSSSCHHHHHHHTTTSCCCSHHH
T ss_pred E----CCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 7----899999999999769988999433578999999999887765310211236666568542233357888633317
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCC---------CCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 479988631566322124554456776---------67555753234---76434554688876433322111111101-
Q gi|254781170|r 161 FRKALIQNLVQADLRSLPVPAIRLTGP---------VTPSNIPRFFD---YPFQAIDPMFPIGEQNALHILRKFCKEKV- 227 (483)
Q Consensus 161 f~k~~~~~~~~~~~~~~p~~~~~~~~~---------~~~~~~~~~~~---~~~~~~~~~~~gGe~~A~~~L~~Fl~~~l- 227 (483)
|++.+.+...+.++ ..|.+......+ ......+.+.+ .+.......|+|||++|+++|++|+++++
T Consensus 185 ~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~gGE~~A~~~L~~Fl~~~l~ 263 (543)
T 2wq7_A 185 FLGIVEQLKVPKVL-GVPEKLKNMPTPPKDEVEQKDSAAYDCPTMKQLVKRPEELGPNKFPGGETEALRRMEESLKDEIW 263 (543)
T ss_dssp HHHHHTTSCCCCCC-CCCCCCSSCCCCCCCHHHHHCTTTTSCCCHHHHCSCGGGCCCCCSCCSHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHCCCCCC-CCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 77788761366565-76400023567750123210110014887887443801105434787469999999999987543
Q ss_pred -CHHHHCCCCCC--CCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -10120268654--566654461111464879999999999864311123477200102320246888788863357888
Q gi|254781170|r 228 -YYYVEQRDIPA--IQGTSQLSPYLSIGVLSPRQCWNRLKEEFVDLLIKPKSGAFSWLNELIWREFYRHLMAFYPSVCMG 304 (483)
Q Consensus 228 -~~Y~~~Rn~p~--~~~tSrLSPyL~~G~IS~R~v~~~~~~~~~~~~~~~~~~~~~fl~eL~WRef~~~~~~~~P~~~~~ 304 (483)
.+|.++||.|+ .++||+|||||+|||||||+|++++.+.... ......+.++|++||+|||||+++++++|++..
T Consensus 264 ~~~y~~~r~~p~~~~~~TSrLSPyL~~G~IS~R~v~~~~~~~~~~-~~~~~~~~~~~~~eL~WRef~~~~~~~~P~~~~- 341 (543)
T 2wq7_A 264 VARFEKPNTAPNSLEPSTTVLSPYLKFGCLSARLFNQKLKEIIKR-QPKHSQPPVSLIGQLMWREFYYTVAAAEPNFDR- 341 (543)
T ss_dssp HHHCCGGGSCSSCSSCSSCCCHHHHHHTSSCHHHHHHHHHHHHHH-CSSCCCTTTSHHHHHHHHHHHHHHHHTCTTTTS-
T ss_pred HHHHHHHHCCCCCHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH-
T ss_conf 335777513743011034631863446876299999999997640-343220068887899999999989986881143-
Q ss_pred HHCCHHHHCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHCC
Q ss_conf 61530110120001046789987227888688999999997167635899999999998-41047002233477664133
Q gi|254781170|r 305 KPFIPWTEKIEWNKDSHLLQAWKQGYTGFPIIDAAMRQLNTIGWMHNRLRMITASFLVK-DLLVDWRIGEEYFMSQLLDG 383 (483)
Q Consensus 305 ~~~~~~~~~~~w~~~~~~~~aW~~G~TG~PlVDA~MR~L~~tG~mhnr~Rm~vaSfl~~-~L~idWr~g~~~f~~~llD~ 383 (483)
.++.+.++.++|++|++.|++|++|+|||||||||||||++|||||||||||||||||| +|+||||+||+||+++||||
T Consensus 342 ~~~~~~~~~~~w~~~~~~~~aW~~G~TG~PlVDAaMRqL~~TGwmHnr~Rm~vasfL~k~~L~idWr~G~~~F~~~liD~ 421 (543)
T 2wq7_A 342 MLGNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQRVFEQLLLDQ 421 (543)
T ss_dssp STTCTTCCCCCCCCCHHHHHHHHTTCSSCHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTTTTCCCHHHHHHHHHHHCTTC
T ss_pred HCCCHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
T ss_conf 12420111244223346788331799898269999999998778047999999999999740868358999999866586
Q ss_pred CHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEHCCCHHHHCCCHHHHCCHHHHHHH------CCCCCCCC
Q ss_conf 111474561002012789847022046458988724899783300824327997780495540131------25789999
Q gi|254781170|r 384 DLASNNGGWQWAASTGNDSVPYFRIFNPTIQGKRFDPQGTFIRHWLPELNNVPTQYIHAPHSWLDK------NDLSLNYP 457 (483)
Q Consensus 384 d~~~n~~~wq~~a~~G~d~~~~~Ri~np~~q~~~~Dp~g~~ir~wvPeL~~~p~~~ih~p~~~~~~------~~~~~~YP 457 (483)
|||||+|||||+||||+|+ ||||||||++||+||||+|+|||+|||||++||+++||+||+++.. +.+|.|||
T Consensus 422 D~a~n~~~Wqw~ag~g~~~-~~~RifNP~~q~~~~Dp~g~fir~wvPEL~~~p~~~ih~Pw~~~~~~~~~~~~~~g~~YP 500 (543)
T 2wq7_A 422 DWALNAGNWMWLSASAFFH-QYFRVYSPVAFGKKTDPQGHYIRKYVPELSKYPAGCIYEPWKASLVDQRAYGCVLGTDYP 500 (543)
T ss_dssp CHHHHHHHHHHHTTSSSCC-CTTCCCCTTTGGGGTCTTCHHHHHHSGGGTTSCHHHHTSGGGSCHHHHHHTTCCBTTTBC
T ss_pred CCCCCHHHHHHHHCCCCCC-CCCCCCCHHHHHHHHCCCCCCHHHHCHHHHCCCHHHHCCCCCCCHHHHHHCCCCCCCCCC
T ss_conf 7103889999985478899-867344888999987889755887487743699777189121999999983985689898
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 763189999999999999996400
Q gi|254781170|r 458 LPIVDHKKACHHTLNQYYAAKKQS 481 (483)
Q Consensus 458 ~pivd~~~~~~~a~~~~~~~~k~~ 481 (483)
.|||||+++|++|+++|+++||.+
T Consensus 501 ~Pivd~~~~~~~a~~~~~~~~~~~ 524 (543)
T 2wq7_A 501 HRIVKHEVVHKENIKRMGAAYKVN 524 (543)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 244879999999999999999862