HHsearch results for GI: 254781170 and protein with PDBid: 2wq7_A

>2wq7_A RE11660P; lyase-DNA complex, DNA repair, DNA lesion, lyase; HET: TDY Z FAD; 2.00A {Drosophila melanogaster} PDB: 2wb2_A* 2wq6_A* 3cvu_A* 3cvv_A* 3cvy_A* 3cvw_A* 3cvx_A*
Probab=100.00  E-value=0  Score=1012.31  Aligned_cols=466  Identities=28%  Similarity=0.441  Sum_probs=403.1

Q ss_pred             CEEEEEECCCCCCCCCHHHHHHHHHCC-----CCEEEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf             426888358675567789999999579-----829999973837847888998999999999999999999759809999
Q gi|254781170|r    8 SVHLVWLRNDLRITDNKALYAACHNSD-----AKVIAVFIATPEQWRQHGISARQSHFIYASLLQVQKSLSQKGIVFQYH   82 (483)
Q Consensus         8 ~~~IvWfRrDLRl~DN~aL~~A~~~~~-----~~vlpvyi~dp~~~~~~~~~~~~~~Fl~esL~~L~~~L~~~g~~L~v~   82 (483)
                      ++.||||||||||+||+||.+|++.++     .+|+||||+||.+++.+..|.+|++||++||.+|+++|+++|++|+|+
T Consensus        29 ~~vi~WFRrDLRl~DN~AL~~A~~~a~~~~~~~~V~pvfi~dp~~~~~~~~~~~r~~Fl~esL~~L~~~L~~lg~~L~v~  108 (543)
T 2wq7_A           29 STLVHWFRKGLRLHDNPALSHIFTAANAAPGRYFVRPIFILDPGILDWMQVGANRWRFLQQTLEDLDNQLRKLNSRLFVV  108 (543)
T ss_dssp             EEEEEEESSCCCSTTCHHHHHHHHHHHHSTTTEEEEEEEEECTTGGGCTTSCHHHHHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred             CCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             87898889995363549999999860201589729999998915435799789999999999999999999779977999


Q ss_pred             ECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCHHHHHHHH-HCCCCEECCCCCCCCCCCCCC-CCCCCCCCCHH
Q ss_conf             6575350899999999870976142100111001100102688875-200000022343455576002-37864432101
Q gi|254781170|r   83 QCSNFDDSIEWLDSYCLQQRVTKLFYNRQYEINEVRRDKLLEKRLQ-HRVICKSFDDSVLLPPGSILN-HALQMYKVYTP  160 (483)
Q Consensus        83 ~~~~~g~~~~~L~~l~~~~~i~~v~~n~~~~~~~~~rd~~i~~~l~-~~~~~~~~~~~~l~~p~~i~~-~~~~~~~vftp  160 (483)
                      .    |++.++|.+|+++++|+.||+|++|++++++||+.|++.|+ .++.+.++++++|++|+.+.+ ..+.++.+|++
T Consensus       109 ~----G~~~~~l~~L~~~~~i~~V~~n~~~~~~~~~rD~~v~~~l~~~~i~~~~~~~~~l~~p~~~~~k~~~~~~~~~~~  184 (543)
T 2wq7_A          109 R----GKPAEVFPRIFKSWRVEMLTFETDIEPYSVTRDAAVQKLAKAEGVRVETHCSHTIYNPELVIAKNLGKAPITYQK  184 (543)
T ss_dssp             E----SCHHHHHHHHHHHTTEEEEEEECCCSHHHHHHHHHHHHHHHHHTCEEEEECCSSSSCHHHHHHHTTTSCCCSHHH
T ss_pred             E----CCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf             7----899999999999769988999433578999999999887765310211236666568542233357888633317


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCC---------CCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf             479988631566322124554456776---------67555753234---76434554688876433322111111101-
Q gi|254781170|r  161 FRKALIQNLVQADLRSLPVPAIRLTGP---------VTPSNIPRFFD---YPFQAIDPMFPIGEQNALHILRKFCKEKV-  227 (483)
Q Consensus       161 f~k~~~~~~~~~~~~~~p~~~~~~~~~---------~~~~~~~~~~~---~~~~~~~~~~~gGe~~A~~~L~~Fl~~~l-  227 (483)
                      |++.+.+...+.++ ..|.+......+         ......+.+.+   .+.......|+|||++|+++|++|+++++ 
T Consensus       185 ~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~gGE~~A~~~L~~Fl~~~l~  263 (543)
T 2wq7_A          185 FLGIVEQLKVPKVL-GVPEKLKNMPTPPKDEVEQKDSAAYDCPTMKQLVKRPEELGPNKFPGGETEALRRMEESLKDEIW  263 (543)
T ss_dssp             HHHHHTTSCCCCCC-CCCCCCSSCCCCCCCHHHHHCTTTTSCCCHHHHCSCGGGCCCCCSCCSHHHHHHHHHHHHTCHHH
T ss_pred             HHHHHHHHCCCCCC-CCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             77788761366565-76400023567750123210110014887887443801105434787469999999999987543


Q ss_pred             -CHHHHCCCCCC--CCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             -10120268654--566654461111464879999999999864311123477200102320246888788863357888
Q gi|254781170|r  228 -YYYVEQRDIPA--IQGTSQLSPYLSIGVLSPRQCWNRLKEEFVDLLIKPKSGAFSWLNELIWREFYRHLMAFYPSVCMG  304 (483)
Q Consensus       228 -~~Y~~~Rn~p~--~~~tSrLSPyL~~G~IS~R~v~~~~~~~~~~~~~~~~~~~~~fl~eL~WRef~~~~~~~~P~~~~~  304 (483)
                       .+|.++||.|+  .++||+|||||+|||||||+|++++.+.... ......+.++|++||+|||||+++++++|++.. 
T Consensus       264 ~~~y~~~r~~p~~~~~~TSrLSPyL~~G~IS~R~v~~~~~~~~~~-~~~~~~~~~~~~~eL~WRef~~~~~~~~P~~~~-  341 (543)
T 2wq7_A          264 VARFEKPNTAPNSLEPSTTVLSPYLKFGCLSARLFNQKLKEIIKR-QPKHSQPPVSLIGQLMWREFYYTVAAAEPNFDR-  341 (543)
T ss_dssp             HHHCCGGGSCSSCSSCSSCCCHHHHHHTSSCHHHHHHHHHHHHHH-CSSCCCTTTSHHHHHHHHHHHHHHHHTCTTTTS-
T ss_pred             HHHHHHHHCCCCCHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH-
T ss_conf             335777513743011034631863446876299999999997640-343220068887899999999989986881143-


Q ss_pred             HHCCHHHHCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHCC
Q ss_conf             61530110120001046789987227888688999999997167635899999999998-41047002233477664133
Q gi|254781170|r  305 KPFIPWTEKIEWNKDSHLLQAWKQGYTGFPIIDAAMRQLNTIGWMHNRLRMITASFLVK-DLLVDWRIGEEYFMSQLLDG  383 (483)
Q Consensus       305 ~~~~~~~~~~~w~~~~~~~~aW~~G~TG~PlVDA~MR~L~~tG~mhnr~Rm~vaSfl~~-~L~idWr~g~~~f~~~llD~  383 (483)
                      .++.+.++.++|++|++.|++|++|+|||||||||||||++|||||||||||||||||| +|+||||+||+||+++||||
T Consensus       342 ~~~~~~~~~~~w~~~~~~~~aW~~G~TG~PlVDAaMRqL~~TGwmHnr~Rm~vasfL~k~~L~idWr~G~~~F~~~liD~  421 (543)
T 2wq7_A          342 MLGNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQRVFEQLLLDQ  421 (543)
T ss_dssp             STTCTTCCCCCCCCCHHHHHHHHTTCSSCHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTTTTCCCHHHHHHHHHHHCTTC
T ss_pred             HCCCHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
T ss_conf             12420111244223346788331799898269999999998778047999999999999740868358999999866586


Q ss_pred             CHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEHCCCHHHHCCCHHHHCCHHHHHHH------CCCCCCCC
Q ss_conf             111474561002012789847022046458988724899783300824327997780495540131------25789999
Q gi|254781170|r  384 DLASNNGGWQWAASTGNDSVPYFRIFNPTIQGKRFDPQGTFIRHWLPELNNVPTQYIHAPHSWLDK------NDLSLNYP  457 (483)
Q Consensus       384 d~~~n~~~wq~~a~~G~d~~~~~Ri~np~~q~~~~Dp~g~~ir~wvPeL~~~p~~~ih~p~~~~~~------~~~~~~YP  457 (483)
                      |||||+|||||+||||+|+ ||||||||++||+||||+|+|||+|||||++||+++||+||+++..      +.+|.|||
T Consensus       422 D~a~n~~~Wqw~ag~g~~~-~~~RifNP~~q~~~~Dp~g~fir~wvPEL~~~p~~~ih~Pw~~~~~~~~~~~~~~g~~YP  500 (543)
T 2wq7_A          422 DWALNAGNWMWLSASAFFH-QYFRVYSPVAFGKKTDPQGHYIRKYVPELSKYPAGCIYEPWKASLVDQRAYGCVLGTDYP  500 (543)
T ss_dssp             CHHHHHHHHHHHTTSSSCC-CTTCCCCTTTGGGGTCTTCHHHHHHSGGGTTSCHHHHTSGGGSCHHHHHHTTCCBTTTBC
T ss_pred             CCCCCHHHHHHHHCCCCCC-CCCCCCCHHHHHHHHCCCCCCHHHHCHHHHCCCHHHHCCCCCCCHHHHHHCCCCCCCCCC
T ss_conf             7103889999985478899-867344888999987889755887487743699777189121999999983985689898


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             763189999999999999996400
Q gi|254781170|r  458 LPIVDHKKACHHTLNQYYAAKKQS  481 (483)
Q Consensus       458 ~pivd~~~~~~~a~~~~~~~~k~~  481 (483)
                      .|||||+++|++|+++|+++||.+
T Consensus       501 ~Pivd~~~~~~~a~~~~~~~~~~~  524 (543)
T 2wq7_A          501 HRIVKHEVVHKENIKRMGAAYKVN  524 (543)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             244879999999999999999862