PSIBLAST alignment of GI: 254781170 and protein with PDB id: 1iqr
gi|17942830|pdb|1IQR|A Chain A, Crystal Structure Of Dna Photolyase From Thermus Thermophilus Length = 420
>gi|21465636|pdb|1IQU|A Chain A, Crystal Structure Of Photolyase-Thymine Complex Length = 420
>gi|146386554|pdb|2J07|A Chain A, Thermus Dna Photolyase With 8-Hdf Antenna Chromophore Length = 420
>gi|146386555|pdb|2J08|A Chain A, Thermus Dna Photolyase With 8-Iod-Riboflavin Antenna Chromophore Length = 420
Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats.
Identities = 121/421 (28%), Positives = 186/421 (44%), Gaps = 35/421 (8%)
Query: 11 LVWLRNDLRITDNKALYAACHNSDAKVIAVFIATPEQWRQHGISARQSHFIYASLLQVQK 70
LVW R DLR+ D+ AL A V+ + + P + R+ + ++ +++
Sbjct: 5 LVWHRGDLRLHDHPALLEALAR--GPVVGLVVLDPNNLKTT---PRRRAWFLENVRALRE 59
Query: 71 SLSQKGIVFQYHQCSNFDDSIEWLDSYCLQQRVTKLFYNRQYEINEVRRDKLLEKRLQHR 130
+ +G + ++ E + + ++ + RD + + L
Sbjct: 60 AYRARGGALWVLEGLPWEKVPEA----ARRLKAKAVYALTSHTPYGRYRDGRVREALPVP 115
Query: 131 VICKSFDDSVLLPPGSILNHALQMYKVYTPFRKALIQNLVQADLRSLPVPAIRLTGPVTP 190
+ + ++Y L G P
Sbjct: 116 LHLLPAPHLLPPDLPRAYRVYTPFSRLYRGAAPPLPPPEALPKGPEEGEIPREDPGLPLP 175
Query: 191 SNIPRFFDYPFQAIDPMFPIGEQNALHILRKFCKEKVYYYVEQRDIPAIQGTSQLSPYLS 250
GE+ AL LR F + K+ Y E+RD +G S+LSPY +
Sbjct: 176 E------------------PGEEAALAGLRAFLEAKLPRYAEERDRLDGEGGSRLSPYFA 217
Query: 251 IGVLSPRQCWNRLKEEFVDLLIKPKSGAFSWLNELIWREFYRHLMAFYPSVCMGKPFIPW 310
+GVLSPR + + GA W+ EL+WR+F HL+ +P + +P P
Sbjct: 218 LGVLSPRLAAWEAERRGGE-------GARKWVAELLWRDFSYHLLYHFPWMAE-RPLDPR 269
Query: 311 TEKIEWNKDSHLLQAWKQGYTGFPIIDAAMRQLNTIGWMHNRLRMITASFLVKDLLVDWR 370
+ W +D L QAW +G TG P++DAAMR+L+ G++ NR RM A F VK LL+ W+
Sbjct: 270 FQAFPWQEDEALFQAWYEGKTGVPLVDAAMRELHATGFLSNRARMNAAQFAVKHLLLPWK 329
Query: 371 IGEEYFMSQLLDGDLASNNGGWQWAASTGNDSVPYFRIFNPTIQGKRFDPQGTFIRHWLP 430
EE F LLDGD A N GWQWA G D+ PYFR+FNP +QG+R DP+G +++ W P
Sbjct: 330 RCEEAFRHLLLDGDRAVNLQGWQWAGGLGVDAAPYFRVFNPVLQGERHDPEGRWLKRWAP 389
Query: 431 E 431
E
Sbjct: 390 E 390