PSIBLAST alignment of GI: 254781170 and protein with PDB id: 1u3c

>gi|52695977|pdb|1U3C|A Chain A, Crystal Structure Of The Phr Domain Of Cryptochrome 1 From Arabidopsis Thaliana Length = 509
>gi|52695978|pdb|1U3D|A Chain A, Crystal Structure Of The Phr Domain Of Cryptochrome 1 From Arabidopsis Thaliana With Amppnp Bound Length = 509
 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 135/486 (27%), Positives = 222/486 (45%), Gaps = 25/486 (5%)

Query: 11  LVWLRNDLRITDNKALYAACHNSDAKVIAVFIATPEQWRQHGISARQSHFIYASLLQVQK 70
           +VW R DLR+ DN AL AA       VIA+F+  PE+   +        ++  SL Q+  
Sbjct: 15  IVWFRRDLRVEDNPALAAAVRA--GPVIALFVWAPEEEGHYHPGRVSRWWLKNSLAQLDS 72

Query: 71  SLSQKGIVFQYHQCSNFDDSIEWLDSYCLQQRVTKLFYNRQYEINEVRRDKLLEKRLQHR 130
           SL   G      + +   DS+  L         +++F+N  Y+   + RD   +  L  +
Sbjct: 73  SLRSLGTCLITKRST---DSVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQ 129

Query: 131 VICKSFDDSVL-LPPGSILNHALQMYKVYTPFRKALIQNLVQADLRSLPVPAIRLTGPVT 189
            I     ++ L   P  + +   + + ++  F +  +      +   LP   I       
Sbjct: 130 GIAVRSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYDPESPLLPPKKIISGDVSK 189

Query: 190 PSNIPRFFDYPFQA-----IDPMFPIGEQNALHILRKFCKEKVYYYVEQRDIPAIQGTSQ 244
               P  F+   +      +   +  G  N    L  F    +  Y + R       TS 
Sbjct: 190 CVADPLVFEDDSEKGSNALLARAWSPGWSNGDKALTTFINGPLLEYSKNRRKADSATTSF 249

Query: 245 LSPYLSIGVLSPRQCWNRLKEEF----VDLLIKPKSGAFSWLNELIWREFYRHLMAFYPS 300
           LSP+L  G +S R+ ++ ++ +      +     +     +L  +  RE+ R++   +P 
Sbjct: 250 LSPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKSIGLREYSRYISFNHP- 308

Query: 301 VCMGKPFIPWTEKIEWNKDSHLLQAWKQGYTGFPIIDAAMRQLNTIGWMHNRLRMITASF 360
               +P +   +   W  D +  +AW+QG TG+P++DA MR+L   GW+H+R+R++ +SF
Sbjct: 309 YSHERPLLGHLKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSF 368

Query: 361 LVKDLLVDWRIGEEYFMSQLLDGDLASNNGGWQWAASTGNDSVPYFRIFNPTIQGKRFDP 420
            VK L + WR G +YF   LLD DL S+  GWQ+   T  DS  + RI NP  +G +FDP
Sbjct: 369 FVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFEGYKFDP 428

Query: 421 QGTFIRHWLPELNNVPTQYIHAPHSWLDKN------DLSLNYPLPIVDHKKACHH---TL 471
            G ++R WLPEL+ +PT +IH P +  +        +L  NYPLPIV   +A       L
Sbjct: 429 NGEYVRRWLPELSRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEAKARLHEAL 488

Query: 472 NQYYAA 477
           +Q +  
Sbjct: 489 SQMWQL 494