PSIBLAST alignment of GI: 254781170 and protein with PDB id: 2vtb
>gi|238828068|pdb|2VTB|B Chain B, Structure Of Cryptochrome 3 - Dna Complex Length = 525
Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats.
Identities = 117/456 (25%), Positives = 205/456 (44%), Gaps = 26/456 (5%)
Query: 9 VHLVWLRNDLRITDNKALYAACHNSDAKVIAVFIATPEQW------RQHGISARQSHFIY 62
V ++W RNDLR+ DN ALY A +SD ++ V+ P + A + F+
Sbjct: 42 VTILWFRNDLRVLDNDALYKAWSSSDT-ILPVYCLDPRLFHTTHFFNFPKTGALRGGFLM 100
Query: 63 ASLLQVQKSLSQKGIVFQYHQCSNFDDSIEWLDSYCLQQRVTKLFYNRQYEINEVRRDKL 122
L+ ++K+L ++G+ E L S +F +++ EV ++L
Sbjct: 101 ECLVDLRKNLMKRGLNLLIRS----GKPEEILPSLAKDFGARTVFAHKETCSEEVDVERL 156
Query: 123 LEKRLQ---HRVICKSFDDSVLLPPGSILNHALQMYKVYTPFRKALIQNLVQADLRSLPV 179
+ + L+ + + S + + + VYT FRK++ +P+
Sbjct: 157 VNQGLKRVGNSTKLELIWGSTMYHKDDLPFDVFDLPDVYTQFRKSVEAKCSIRSSTRIPL 216
Query: 180 PAIRLTGPVTPSNIPRFFD---YPFQAIDPMFPIGEQNALHILRKFCKEKVY---YYVEQ 233
++P P + M +G ++A K Y E
Sbjct: 217 SLGPTPSVDDWGDVPTLEKLGVEPQEVTRGMRFVGGESAGVGRVFEYFWKKDLLKVYKET 276
Query: 234 RD-IPAIQGTSQLSPYLSIGVLSPRQCWNRLKEEFVDLLIKPKSGAFSWLNELIWREFYR 292
R+ + +++ SP+L+ G +SPR + ++ + + + L ELIWR+++R
Sbjct: 277 RNGMLGPDYSTKFSPWLAFGCISPRFIYEEVQRYEKERVANN--STYWVLFELIWRDYFR 334
Query: 293 HLMAFYPSVCMGKPFIPWTEKIEWNKDSHLLQAWKQGYTGFPIIDAAMRQLNTIGWMHNR 352
L + P +W++D L ++W+ TG+P+IDA M++L+T G+M NR
Sbjct: 335 FLSIKCGNSLFH-LGGPRNVNGKWSQDQKLFESWRDAKTGYPLIDANMKELSTTGFMSNR 393
Query: 353 LRMITASFLVKDLLVDWRIGEEYFMSQLLDGDLASNNGGWQWAASTGNDSVPYFRIFNPT 412
R I SFLV+D+ +DWR+G E+F + LLD D SN G W + A ND R F+
Sbjct: 394 GRQIVCSFLVRDMGLDWRMGAEWFETCLLDYDPCSNYGNWTYGAGV-NDPRE-DRYFSIP 451
Query: 413 IQGKRFDPQGTFIRHWLPELNNVPTQYIHAPHSWLD 448
Q + +DP+G ++ WL +L +P + H P +
Sbjct: 452 KQAQNYDPEGEYVAFWLQQLRRLPKEKRHWPGRLMY 487