PSIBLAST alignment of GI: 254781170 and protein with PDB id: 2vtb

>gi|238828068|pdb|2VTB|B Chain B, Structure Of Cryptochrome 3 - Dna Complex Length = 525
 Score =  225 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 117/456 (25%), Positives = 205/456 (44%), Gaps = 26/456 (5%)

Query: 9   VHLVWLRNDLRITDNKALYAACHNSDAKVIAVFIATPEQW------RQHGISARQSHFIY 62
           V ++W RNDLR+ DN ALY A  +SD  ++ V+   P  +            A +  F+ 
Sbjct: 42  VTILWFRNDLRVLDNDALYKAWSSSDT-ILPVYCLDPRLFHTTHFFNFPKTGALRGGFLM 100

Query: 63  ASLLQVQKSLSQKGIVFQYHQCSNFDDSIEWLDSYCLQQRVTKLFYNRQYEINEVRRDKL 122
             L+ ++K+L ++G+              E L S         +F +++    EV  ++L
Sbjct: 101 ECLVDLRKNLMKRGLNLLIRS----GKPEEILPSLAKDFGARTVFAHKETCSEEVDVERL 156

Query: 123 LEKRLQ---HRVICKSFDDSVLLPPGSILNHALQMYKVYTPFRKALIQNLVQADLRSLPV 179
           + + L+   +    +    S +     +      +  VYT FRK++           +P+
Sbjct: 157 VNQGLKRVGNSTKLELIWGSTMYHKDDLPFDVFDLPDVYTQFRKSVEAKCSIRSSTRIPL 216

Query: 180 PAIRLTGPVTPSNIPRFFD---YPFQAIDPMFPIGEQNALHILRKFCKEKVY---YYVEQ 233
                       ++P        P +    M  +G ++A          K      Y E 
Sbjct: 217 SLGPTPSVDDWGDVPTLEKLGVEPQEVTRGMRFVGGESAGVGRVFEYFWKKDLLKVYKET 276

Query: 234 RD-IPAIQGTSQLSPYLSIGVLSPRQCWNRLKEEFVDLLIKPKSGAFSWLNELIWREFYR 292
           R+ +     +++ SP+L+ G +SPR  +  ++    + +       +  L ELIWR+++R
Sbjct: 277 RNGMLGPDYSTKFSPWLAFGCISPRFIYEEVQRYEKERVANN--STYWVLFELIWRDYFR 334

Query: 293 HLMAFYPSVCMGKPFIPWTEKIEWNKDSHLLQAWKQGYTGFPIIDAAMRQLNTIGWMHNR 352
            L     +        P     +W++D  L ++W+   TG+P+IDA M++L+T G+M NR
Sbjct: 335 FLSIKCGNSLFH-LGGPRNVNGKWSQDQKLFESWRDAKTGYPLIDANMKELSTTGFMSNR 393

Query: 353 LRMITASFLVKDLLVDWRIGEEYFMSQLLDGDLASNNGGWQWAASTGNDSVPYFRIFNPT 412
            R I  SFLV+D+ +DWR+G E+F + LLD D  SN G W + A   ND     R F+  
Sbjct: 394 GRQIVCSFLVRDMGLDWRMGAEWFETCLLDYDPCSNYGNWTYGAGV-NDPRE-DRYFSIP 451

Query: 413 IQGKRFDPQGTFIRHWLPELNNVPTQYIHAPHSWLD 448
            Q + +DP+G ++  WL +L  +P +  H P   + 
Sbjct: 452 KQAQNYDPEGEYVAFWLQQLRRLPKEKRHWPGRLMY 487