RPSBLAST alignment of GI: 254781170 and protein with PDBid: 1owl

>1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus pcc 6301} SCOP: a.99.1.1 c.28.1.1 PDB: 1owm_A* 1own_A* 1owo_A* 1owp_A* 1qnf_A* 1tez_A* Length = 484

 Score =  354 bits (910), Expect = 2e-98
 Identities = 156/479 (32%), Positives = 222/479 (46%), Gaps = 19/479 (3%)

Query: 11  LVWLRNDLRITDNKALYAACHNSDAKVIAVFIATPEQWRQHGISARQSHFIYASLLQVQK 70
           L W R DLR++DN  L AA   S  ++I +F   P+  +   ++  +  ++   L ++Q+
Sbjct: 6   LFWHRRDLRLSDNIGLAAARAQSA-QLIGLFCLDPQILQSADMAPARVAYLQGCLQELQQ 64

Query: 71  SLSQKGIVFQYHQCSNFDDSIEWLDSYCLQQRVTKLFYNRQYEINEVRRDKLLEKRLQHR 130
              Q G      Q     D    +     Q +   +++N+  E     RD  +   L+  
Sbjct: 65  RYQQAGSRLLLLQG----DPQHLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTA 120

Query: 131 -VICKSFDDSVLLPPGSILNHALQMYKVYTPFRKALIQNLVQADLRSLPVPAIRLTGPVT 189
            +      D +L  P  IL+ +   Y VY PF K          + +           +T
Sbjct: 121 GIRAVQLWDQLLHSPDQILSGSGNPYSVYGPFWKNWQAQPKPTPVATPTELVDLSPEQLT 180

Query: 190 PSNIPRFFDYPFQAIDPM-------FPIGEQNALHILRKFCKEKVYYYVEQRDIPAIQGT 242
                   + P                 GE  A+  L++FC   +  Y  QR+ PA  GT
Sbjct: 181 AIAPLLLSELPTLKQLGFDWDGGFPVEPGETAAIARLQEFCDRAIADYDPQRNFPAEAGT 240

Query: 243 SQLSPYLSIGVLSPRQCWNRLKEEF-VDLLIKPKSGAFSWLNELIWREFYRHLMAFYPSV 301
           S LSP L  G +  RQ W        +    + ++    W  EL WREFY+H +  +PS+
Sbjct: 241 SGLSPALKFGAIGIRQAWQAASAAHALSRSDEARNSIRVWQQELAWREFYQHALYHFPSL 300

Query: 302 CMGKPFIPWTEKIEWNKDSHLLQAWKQGYTGFPIIDAAMRQLNTIGWMHNRLRMITASFL 361
               P+    ++  W     L  AW Q  TG+PI+DAAMRQL   GWMHNR RMI ASFL
Sbjct: 301 AD-GPYRSLWQQFPWENREALFTAWTQAQTGYPIVDAAMRQLTETGWMHNRCRMIVASFL 359

Query: 362 VKDLLVDWRIGEEYFMSQLLDGDLASNNGGWQWAASTGNDSVPYFRIFNPTIQGKRFDPQ 421
            KDL++DWR GE++FM  L+DGDLA+NNGGWQW+AS+G D  P  RIFNP  Q K+FD  
Sbjct: 360 TKDLIIDWRRGEQFFMQHLVDGDLAANNGGWQWSASSGMDPKP-LRIFNPASQAKKFDAT 418

Query: 422 GTFIRHWLPELNNVPTQYIHAPHSWLDKNDLSLNYPLPIVDHKKACHHTLNQYYAAKKQ 480
            T+I+ WLPEL +V  + + +             YP PIV+H          Y   K  
Sbjct: 419 ATYIKRWLPELRHVHPKDLISGEIT---PIERRGYPAPIVNHNLRQKQFKALYNQLKAA 474