RPSBLAST alignment of GI: 254781170 and SCOP domain: d1owla2

Alignment

>d1owla2 c.28.1.1 (A:3-204) DNA photolyase {Synechococcus elongatus [TaxId: 32046]} Length = 202

 Score = 84.7 bits (208), Expect = 1e-17
 Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 9/194 (4%)

Query: 11  LVWLRNDLRITDNKALYAACHNSDAKVIAVFIATPEQWRQHGISARQSHFIYASLLQVQK 70
           L W R DLR++DN  L AA   S  ++I +F   P+  +   ++  +  ++   L ++Q+
Sbjct: 4   LFWHRRDLRLSDNIGLAAARAQSA-QLIGLFCLDPQILQSADMAPARVAYLQGCLQELQQ 62

Query: 71  SLSQKGIVFQYHQCSNFDDSIEWLDSYCLQQRVTKLFYNRQYEINEVRRDKLLEKRLQHR 130
              Q G      Q        +       +      +          R  ++        
Sbjct: 63  RYQQAGSRLLLLQGDPQHLIPQLAQQLQAEAVY---WNQDIEPYGRDRDGQVAAALKTAG 119

Query: 131 VICKSFDDSVLLPPGSILNHALQMYKVYTPFRKALIQNLVQADLRSLPVPAIRLTGPVTP 190
           +      D +L  P  IL+ +   Y VY PF K              PV        ++P
Sbjct: 120 IRAVQLWDQLLHSPDQILSGSGNPYSVYGPFWKNWQAQPKPT-----PVATPTELVDLSP 174

Query: 191 SNIPRFFDYPFQAI 204
             +          +
Sbjct: 175 EQLTAIAPLLLSEL 188

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Cryptochrome/photolyase, N-terminal domain
superfamily: Cryptochrome/photolyase, N-terminal domain
family: Cryptochrome/photolyase, N-terminal domain
domain: DNA photolyase
species: Synechococcus elongatus [TaxId: 32046]