HHsearch alignment for GI: 254781171 and conserved domain: COG1301

>COG1301 GltP Na+/H+-dicarboxylate symporters [Energy production and conversion].
Probab=100.00  E-value=0  Score=664.90  Aligned_cols=401  Identities=27%  Similarity=0.487  Sum_probs=369.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf             4454499999999999999999968875-788878789999999999999999999999832531134665899999999
Q gi|254781171|r   10 DKQQKAYLLYVSSILIGIFSGTTDYVIF-NETAEFIVNVFVRIFKFISLPLISLSLIVSLSKCVPEQGMGKLWGKTVFYT   88 (420)
Q Consensus        10 ~k~~k~~i~l~~~illGi~~G~~~~~~~-~~~~~~iG~ifi~lLkmiviPLIf~sii~~I~~l~~~~~~gki~~~ti~~~   88 (420)
T Consensus         3 ~~~~~l~~qv~iglilGi~~Gl~~~~~~~~~~l~plg~~Fi~Likmii~PlVf~tlv~gIa~~~~~k~~gr~g~ktl~yf   82 (415)
T COG1301           3 SKKLSLYLQVLIGLILGILVGLFLPELGAAIYLKPLGDIFIKLIKMIIIPLVFFTLVLGIASLGDLKKLGRLGGKTLIYF   82 (415)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_conf             30224999999999999999853565331256503889999999999999999999999974103277799999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC---CCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHC
Q ss_conf             9999999999875012348641011000012224---4768989998536640457655113205355666421377404
Q gi|254781171|r   89 MLTTMLAASVALCTYGLISPSNMITKPDVAVNIG---KMNFWNYVANLIPNNVVAPFLESQVIGILLISGSIGIATHFIT  165 (420)
Q Consensus        89 ~~tt~iA~~igl~~~~l~~Pg~~~~~~~~~~~~~---~~~~~~~l~~liP~Ni~~ala~gniL~iivfai~~Gia~~~~~  165 (420)
T Consensus        83 ~~tt~~A~~iGl~~~~~~~Pg~g~~~~~~~~~~~~~~~~~~~~~l~~iiP~ni~~a~a~g~vLqil~fail~G~al~~~~  162 (415)
T COG1301          83 LVTTTLAIAIGLVVANVLQPGAGINIDPATLDTGAESEVSILDFLLDIIPTNIFGALAEGNVLQILFFAILFGLALAALG  162 (415)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf             99999999999999998088877777710157642121039999886168974777257981999999999999998754


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q ss_conf             645301799999999999999989879897778789999999850112111012468999999999999999876644-1
Q gi|254781171|r  166 DKHIKSSTIVFFEGIHSIFLTITNWVMKIIPIALGSFIAVTILQFKKGLNISGLGEYLSVVILSNLIQGFIVLPVILY-I  244 (420)
Q Consensus       166 ~k~~~~~~~~~~~~~~~i~~~ii~~im~l~Pigvf~lia~~~~~~~~~~~l~~l~~~l~~~~~~~~i~~~v~~~~i~~-~  244 (420)
T Consensus       163 ~~~-~~~v~~~~~~~~~~m~~v~~~vm~laPigvf~~~a~~v~~~G~~-~L~~l~~~v~~~~~~~~l~~~vvl~~~~~~~  240 (415)
T COG1301         163 EKG-KPPVENLFESLSEAMFKVTNFVMRLAPIGVFGLMAFTVAKYGFG-SLLSLGKLVLAVYLGLLLFVFVVLGLLLKLL  240 (415)
T ss_pred             CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             224-23799999999999999999999971499999999999984776-7999999999999999999999999999995


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf             25041100110024788988851765507799999973178998899899999987378850567799999974236978
Q gi|254781171|r  245 KGFNPLTIVKGMFPALAVAFFSKSSAGTLPVTMRTAEKNLNISPEVSRSILPFCTSINMNGCAAFICITLIYVMQNNGIE  324 (420)
Q Consensus       245 ~~~np~~~~k~~~~~~~~Af~T~SS~atlP~~l~~~~~~lgv~~~i~~fviPlG~tinm~G~ai~~~~~~~f~a~~~gi~  324 (420)
T Consensus       241 ~g~s~~~~~r~~~~~~~~Af~T~SS~atLPv~m~~~e~~~Gv~~~i~~fvvPlG~t~nldGtaiy~~~a~~FIAq~~g~~  320 (415)
T COG1301         241 SGFSPFKFLRYISEALLLAFSTSSSEATLPVTMEKAEKSLGVPKSIVSFVVPLGYTFNLDGTAIYQTLAALFIAQAYGIP  320 (415)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEECCCCHHHHHHHHHHHHHHHHCCC
T ss_conf             48888999999889999998532043566899999998569984346799535742588611999999999999994899


Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             89567999999999998421388641599999999975499999999999657764156789998778999999998730
Q gi|254781171|r  325 ATFSTLFLWILMASVISAIGTAGVPMGCFFLSASLLTNMGIPINIMSMILPFYSIVDMFETTLNVWSDSCVTVIVNKSYP  404 (420)
Q Consensus       325 l~~~~~~~~i~~~~v~as~g~~gvPg~~~v~~~~vl~~~glP~~~~~lli~id~i~D~~rT~~NV~gd~~~a~iv~~~~~  404 (420)
T Consensus       321 Ls~~~~l~-~~~~~~l~S~G~AGVpg~~~v~l~~~L~~vglp~~g~aLi~gid~~ld~~rT~~Nv~Gd~~~~~iva~~e~  399 (415)
T COG1301         321 LSLGQQLT-LLLVAMLASKGAAGVPGGGLVVLAATLSSVGLPLEGLALILGIDRFLDMARTATNVTGDAVATVVVAKWEG  399 (415)
T ss_pred             CCHHHHHH-HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             88999999-99999999503589984299999999998278087899999999999888999998755789887531305


Q ss_pred             H-HHHHHHHH
Q ss_conf             0-01347754
Q gi|254781171|r  405 K-SSDHPENA  413 (420)
Q Consensus       405 ~-~~~~~~~~  413 (420)
T Consensus       400 ~~~~~~v~~~  409 (415)
T COG1301         400 EEKADAVLSE  409 (415)
T ss_pred             CCCHHHHHHC
T ss_conf             4317788724