HHsearch alignment for GI: 254781171 and conserved domain: COG1301
>COG1301 GltP Na+/H+-dicarboxylate symporters [Energy production and conversion].
Probab=100.00 E-value=0 Score=664.90 Aligned_cols=401 Identities=27% Similarity=0.487 Sum_probs=369.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 4454499999999999999999968875-788878789999999999999999999999832531134665899999999
Q gi|254781171|r 10 DKQQKAYLLYVSSILIGIFSGTTDYVIF-NETAEFIVNVFVRIFKFISLPLISLSLIVSLSKCVPEQGMGKLWGKTVFYT 88 (420)
Q Consensus 10 ~k~~k~~i~l~~~illGi~~G~~~~~~~-~~~~~~iG~ifi~lLkmiviPLIf~sii~~I~~l~~~~~~gki~~~ti~~~ 88 (420)
T Consensus 3 ~~~~~l~~qv~iglilGi~~Gl~~~~~~~~~~l~plg~~Fi~Likmii~PlVf~tlv~gIa~~~~~k~~gr~g~ktl~yf 82 (415)
T COG1301 3 SKKLSLYLQVLIGLILGILVGLFLPELGAAIYLKPLGDIFIKLIKMIIIPLVFFTLVLGIASLGDLKKLGRLGGKTLIYF 82 (415)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_conf 30224999999999999999853565331256503889999999999999999999999974103277799999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC---CCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999875012348641011000012224---4768989998536640457655113205355666421377404
Q gi|254781171|r 89 MLTTMLAASVALCTYGLISPSNMITKPDVAVNIG---KMNFWNYVANLIPNNVVAPFLESQVIGILLISGSIGIATHFIT 165 (420)
Q Consensus 89 ~~tt~iA~~igl~~~~l~~Pg~~~~~~~~~~~~~---~~~~~~~l~~liP~Ni~~ala~gniL~iivfai~~Gia~~~~~ 165 (420)
T Consensus 83 ~~tt~~A~~iGl~~~~~~~Pg~g~~~~~~~~~~~~~~~~~~~~~l~~iiP~ni~~a~a~g~vLqil~fail~G~al~~~~ 162 (415)
T COG1301 83 LVTTTLAIAIGLVVANVLQPGAGINIDPATLDTGAESEVSILDFLLDIIPTNIFGALAEGNVLQILFFAILFGLALAALG 162 (415)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999998088877777710157642121039999886168974777257981999999999999998754
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q ss_conf 645301799999999999999989879897778789999999850112111012468999999999999999876644-1
Q gi|254781171|r 166 DKHIKSSTIVFFEGIHSIFLTITNWVMKIIPIALGSFIAVTILQFKKGLNISGLGEYLSVVILSNLIQGFIVLPVILY-I 244 (420)
Q Consensus 166 ~k~~~~~~~~~~~~~~~i~~~ii~~im~l~Pigvf~lia~~~~~~~~~~~l~~l~~~l~~~~~~~~i~~~v~~~~i~~-~ 244 (420)
T Consensus 163 ~~~-~~~v~~~~~~~~~~m~~v~~~vm~laPigvf~~~a~~v~~~G~~-~L~~l~~~v~~~~~~~~l~~~vvl~~~~~~~ 240 (415)
T COG1301 163 EKG-KPPVENLFESLSEAMFKVTNFVMRLAPIGVFGLMAFTVAKYGFG-SLLSLGKLVLAVYLGLLLFVFVVLGLLLKLL 240 (415)
T ss_pred CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 224-23799999999999999999999971499999999999984776-7999999999999999999999999999995
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 25041100110024788988851765507799999973178998899899999987378850567799999974236978
Q gi|254781171|r 245 KGFNPLTIVKGMFPALAVAFFSKSSAGTLPVTMRTAEKNLNISPEVSRSILPFCTSINMNGCAAFICITLIYVMQNNGIE 324 (420)
Q Consensus 245 ~~~np~~~~k~~~~~~~~Af~T~SS~atlP~~l~~~~~~lgv~~~i~~fviPlG~tinm~G~ai~~~~~~~f~a~~~gi~ 324 (420)
T Consensus 241 ~g~s~~~~~r~~~~~~~~Af~T~SS~atLPv~m~~~e~~~Gv~~~i~~fvvPlG~t~nldGtaiy~~~a~~FIAq~~g~~ 320 (415)
T COG1301 241 SGFSPFKFLRYISEALLLAFSTSSSEATLPVTMEKAEKSLGVPKSIVSFVVPLGYTFNLDGTAIYQTLAALFIAQAYGIP 320 (415)
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEECCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 48888999999889999998532043566899999998569984346799535742588611999999999999994899
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89567999999999998421388641599999999975499999999999657764156789998778999999998730
Q gi|254781171|r 325 ATFSTLFLWILMASVISAIGTAGVPMGCFFLSASLLTNMGIPINIMSMILPFYSIVDMFETTLNVWSDSCVTVIVNKSYP 404 (420)
Q Consensus 325 l~~~~~~~~i~~~~v~as~g~~gvPg~~~v~~~~vl~~~glP~~~~~lli~id~i~D~~rT~~NV~gd~~~a~iv~~~~~ 404 (420)
T Consensus 321 Ls~~~~l~-~~~~~~l~S~G~AGVpg~~~v~l~~~L~~vglp~~g~aLi~gid~~ld~~rT~~Nv~Gd~~~~~iva~~e~ 399 (415)
T COG1301 321 LSLGQQLT-LLLVAMLASKGAAGVPGGGLVVLAATLSSVGLPLEGLALILGIDRFLDMARTATNVTGDAVATVVVAKWEG 399 (415)
T ss_pred CCHHHHHH-HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 88999999-99999999503589984299999999998278087899999999999888999998755789887531305
Q ss_pred H-HHHHHHHH
Q ss_conf 0-01347754
Q gi|254781171|r 405 K-SSDHPENA 413 (420)
Q Consensus 405 ~-~~~~~~~~ 413 (420)
T Consensus 400 ~~~~~~v~~~ 409 (415)
T COG1301 400 EEKADAVLSE 409 (415)
T ss_pred CCCHHHHHHC
T ss_conf 4317788724