HHsearch alignment of GI: 254781171 and MMDB domain: 2nwl_A_
>2nwl_A (A:) GLTPH, glutamate symport protein; alpha helical, membrane protein, helical hairpin, unwound region, transport protein; HET: PLM; 2.96A {Pyrococcus horikoshii} PDB: 2nww_A* 1xfh_A* 2nwx_A*
Probab=97.72 E-value=0.0019 Score=36.26 Aligned_cols=209 Identities=12% Similarity=0.024 Sum_probs=117.5
Q ss_pred CCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCC
Q ss_conf 98456-401544544999999999999999999-----68875788878789999999-999999999999999832531
Q gi|254781171|r 1 MSLGK-MITLDKQQKAYLLYVSSILIGIFSGTT-----DYVIFNETAEFIVNVFVRIF-KFISLPLISLSLIVSLSKCVP 73 (420)
Q Consensus 1 m~~~~-~~~~~k~~k~~i~l~~~illGi~~G~~-----~~~~~~~~~~~iG~ifi~lL-kmiviPLIf~sii~~I~~l~~ 73 (420)
|.+++ .++++-..++.+.++.|+++|..++.. ...++..--+..-+ .++++ =-+|.--+..++ ....+-+.
T Consensus 1 m~~~~~~~k~sl~~~ilialilGi~lG~~~~~~~~~~~~~~~l~~~G~lfi~-lLkm~V~PlVf~sii~~I-~~L~~~~~ 78 (422)
T 2nwl_A 1 MGLYRKYIEYPVLIKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVR-LLKMLVMPIVFASLVVGA-ASISPARL 78 (422)
T ss_dssp ---------CCCTTHHHHHHHHHHHHHHHHHHTTTHHHHHHHTHHHHHHHHH-HHHHHHHHHHHHHHHHHT-TSCTTTTH
T ss_pred CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-HHCCCCCC
T ss_conf 9288886226699999999999999999954322027899999999999999-999999999999999999-74551101
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC----CCCCCCCCCCCC---CCCCCHHHHHHHHCCCCHHHHHHHHC
Q ss_conf 13466589999999999999999998750123486----410110000122---24476898999853664045765511
Q gi|254781171|r 74 EQGMGKLWGKTVFYTMLTTMLAASVALCTYGLISP----SNMITKPDVAVN---IGKMNFWNYVANLIPNNVVAPFLESQ 146 (420)
Q Consensus 74 ~~~~gki~~~ti~~~~~tt~iA~~igl~~~~l~~P----g~~~~~~~~~~~---~~~~~~~~~l~~liP~Ni~~ala~gn 146 (420)
.+-.+|....-+........++...+..+...-.. ......+....+ .-..-+.+.+.+.+|+|.+.+...++
T Consensus 79 g~l~~~~~~~f~~~t~~A~~ig~~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~ni~~~~~~~~~~~~~~~a 158 (422)
T 2nwl_A 79 GRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFA 158 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSCCCCCCCCCC-----CCTHHHHGGGSCSCHHHHHHTCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHH
T ss_conf 22799999999999999999999999876013332200103320432102699999982552179887457743036788
Q ss_pred CCHHHHHHHHHHHHHH--HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 3205355666421377--40464530179999999999999998987989777878999999985011
Q gi|254781171|r 147 VIGILLISGSIGIATH--FITDKHIKSSTIVFFEGIHSIFLTITNWVMKIIPIALGSFIAVTILQFKK 212 (420)
Q Consensus 147 iL~iivfai~~Gia~~--~~~~k~~~~~~~~~~~~~~~i~~~ii~~im~l~Pigvf~lia~~~~~~~~ 212 (420)
+++.++++...|.+.. .-+.+.-.+.+..+.+.+.+++..+++ ..++.=++..+-..........
T Consensus 159 il~gi~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~ii~-l~P~gvf~lia~~~~~~g~~~l 225 (422)
T 2nwl_A 159 IILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQ-YAPIGVFALIAYVMAEQGVHVV 225 (422)
T ss_dssp HHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SHHHHHHHHHHHHHTTTGGGCC
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHH
T ss_conf 888999998402210345667889999999999999756887776-7899999999998741355778