HHsearch alignment of GI: 254781171 and MMDB domain: 2nwl_A_

>2nwl_A (A:) GLTPH, glutamate symport protein; alpha helical, membrane protein, helical hairpin, unwound region, transport protein; HET: PLM; 2.96A {Pyrococcus horikoshii} PDB: 2nww_A* 1xfh_A* 2nwx_A*
Probab=97.72  E-value=0.0019  Score=36.26  Aligned_cols=209  Identities=12%  Similarity=0.024  Sum_probs=117.5

Q ss_pred             CCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCC
Q ss_conf             98456-401544544999999999999999999-----68875788878789999999-999999999999999832531
Q gi|254781171|r    1 MSLGK-MITLDKQQKAYLLYVSSILIGIFSGTT-----DYVIFNETAEFIVNVFVRIF-KFISLPLISLSLIVSLSKCVP   73 (420)
Q Consensus         1 m~~~~-~~~~~k~~k~~i~l~~~illGi~~G~~-----~~~~~~~~~~~iG~ifi~lL-kmiviPLIf~sii~~I~~l~~   73 (420)
                      |.+++ .++++-..++.+.++.|+++|..++..     ...++..--+..-+ .++++ =-+|.--+..++ ....+-+.
T Consensus         1 m~~~~~~~k~sl~~~ilialilGi~lG~~~~~~~~~~~~~~~l~~~G~lfi~-lLkm~V~PlVf~sii~~I-~~L~~~~~   78 (422)
T 2nwl_A            1 MGLYRKYIEYPVLIKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVR-LLKMLVMPIVFASLVVGA-ASISPARL   78 (422)
T ss_dssp             ---------CCCTTHHHHHHHHHHHHHHHHHHTTTHHHHHHHTHHHHHHHHH-HHHHHHHHHHHHHHHHHT-TSCTTTTH
T ss_pred             CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-HHCCCCCC
T ss_conf             9288886226699999999999999999954322027899999999999999-999999999999999999-74551101


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC----CCCCCCCCCCCC---CCCCCHHHHHHHHCCCCHHHHHHHHC
Q ss_conf             13466589999999999999999998750123486----410110000122---24476898999853664045765511
Q gi|254781171|r   74 EQGMGKLWGKTVFYTMLTTMLAASVALCTYGLISP----SNMITKPDVAVN---IGKMNFWNYVANLIPNNVVAPFLESQ  146 (420)
Q Consensus        74 ~~~~gki~~~ti~~~~~tt~iA~~igl~~~~l~~P----g~~~~~~~~~~~---~~~~~~~~~l~~liP~Ni~~ala~gn  146 (420)
                      .+-.+|....-+........++...+..+...-..    ......+....+   .-..-+.+.+.+.+|+|.+.+...++
T Consensus        79 g~l~~~~~~~f~~~t~~A~~ig~~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~ni~~~~~~~~~~~~~~~a  158 (422)
T 2nwl_A           79 GRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFA  158 (422)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSCCCCCCCCCC-----CCTHHHHGGGSCSCHHHHHHTCCHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHH
T ss_conf             22799999999999999999999999876013332200103320432102699999982552179887457743036788


Q ss_pred             CCHHHHHHHHHHHHHH--HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             3205355666421377--40464530179999999999999998987989777878999999985011
Q gi|254781171|r  147 VIGILLISGSIGIATH--FITDKHIKSSTIVFFEGIHSIFLTITNWVMKIIPIALGSFIAVTILQFKK  212 (420)
Q Consensus       147 iL~iivfai~~Gia~~--~~~~k~~~~~~~~~~~~~~~i~~~ii~~im~l~Pigvf~lia~~~~~~~~  212 (420)
                      +++.++++...|.+..  .-+.+.-.+.+..+.+.+.+++..+++ ..++.=++..+-..........
T Consensus       159 il~gi~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~ii~-l~P~gvf~lia~~~~~~g~~~l  225 (422)
T 2nwl_A          159 IILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQ-YAPIGVFALIAYVMAEQGVHVV  225 (422)
T ss_dssp             HHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SHHHHHHHHHHHHHTTTGGGCC
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHH
T ss_conf             888999998402210345667889999999999999756887776-7899999999998741355778