RPSBLAST alignment of GI: 254781171 and SCOP domain: d2nwwa1

Alignment
>d2nwwa1 f.49.1.1 (A:12-416) Proton glutamate symport protein {Pyrococcus horikoshii [TaxId: 53953]} Length = 405
 Score =  140 bits (354), Expect = 2e-34
 Identities = 100/396 (25%), Positives = 184/396 (46%), Gaps = 20/396 (5%)

Query: 23  ILIGIFSGTTDYV-IFNETAEFIVNVFVRIFKFISLPLISLSLIVSLSKCVPEQGMGKLW 81
            ++G+  G   Y    +   +   ++FVR+ K + +P++  SL+V  +   P + +G++ 
Sbjct: 13  AIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPAR-LGRVG 71

Query: 82  GKTVFYTMLTTMLAASVALCTYGLISPSNMIT---KPDVAVNIGKMNFWNYVANLIPNNV 138
            K V Y +LT+  A ++ +    L +P   I                  + + +++P N 
Sbjct: 72  VKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNP 131

Query: 139 VAPFLESQVIGILLISGSIGIATHFITDK------HIKSSTIVFFEGIHSIFLTITNWVM 192
                  QV+  +  +  +GIA  ++ +           + +    G+      I N VM
Sbjct: 132 FGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVM 191

Query: 193 KIIPIALGSFIAVTILQFKKGLNISGLGEYLSVVILSNLIQGFIVLPVILYIKGFNPLTI 252
           +  PI + + IA  + +    +      +  + V +   +Q  +V  V+L I G +P++ 
Sbjct: 192 QYAPIGVFALIAYVMAEQGVHVVGEL-AKVTAAVYVGLTLQILLVYFVLLKIYGIDPISF 250

Query: 253 VKGMFPALAVAFFSKSSAGTLPVTMRTAEKNLNISPEVSRSILPFCTSINMNGCAAFICI 312
           +K    A+  AF ++SS+GTLPVTMR A++ + IS  +    LP   +INM+G A +  +
Sbjct: 251 IKHAKDAMLTAFVTRSSSGTLPVTMRVAKE-MGISEGIYSFTLPLGATINMDGTALYQGV 309

Query: 313 TLIYVMQNNGIEATFSTLFLWILMASVISAIGTAGVPMGCFFLSASLLTNMGIPINI--- 369
              ++    G   T       +L A V+++IGTAGVP     + A +L ++G+P+     
Sbjct: 310 CTFFIANALGSHLTVGQQLTIVLTA-VLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNV 368

Query: 370 ---MSMILPFYSIVDMFETTLNVWSDSCVTVIVNKS 402
               +MIL   +I+DM  T +NV  D   T IV K+
Sbjct: 369 AAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKT 404

SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: Proton glutamate symport protein
superfamily: Proton glutamate symport protein
family: Proton glutamate symport protein
domain: Proton glutamate symport protein
species: Pyrococcus horikoshii [TaxId: 53953]