HHsearch alignment for GI: 254781172 and conserved domain: COG0177

>COG0177 Nth Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair].

Probab=91.01  E-value=0.55  Score=26.78  Aligned_cols=45  Identities=13%  Similarity=0.264  Sum_probs=22.0

Q ss_pred             HHHHHHHHHCCCCCCEEEEEHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf             035555653057654045410110106777531000100013421001456899
Q gi|254781172|r  487 GKQQLDFFFKSEDPAFSIRIPADIFTLQRRQQTSTTKIENILGFGDVSVTNLYD  540 (731)
Q Consensus       487 G~k~Ie~L~e~~~~~g~I~~~~DLy~L~~~~~~~~~~l~~l~GfgeKsa~nL~~  540 (731)
T Consensus        47 vn~at~~Lf~~------~~t~e~l~~a~~~~---l~~~I~~iGlyr~KAk~I~~   91 (211)
T COG0177          47 VNKATPALFKR------YPTPEDLLNADEEE---LEELIKSIGLYRNKAKNIKE   91 (211)
T ss_pred             HHHHHHHHHHH------CCCHHHHHCCCHHH---HHHHHHHCCCCHHHHHHHHH
T ss_conf             99999999997------59999997499999---99999863871899999999