HHsearch alignment for GI: 254781172 and conserved domain: COG2231
>COG2231 Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair].
Probab=93.54 E-value=0.17 Score=30.70 Aligned_cols=40 Identities=23% Similarity=0.475 Sum_probs=27.6
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 9999882998999997897761251177876138886789999999996
Q gi|254781172|r 568 RSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGDIIAQAIVEFY 616 (731)
Q Consensus 568 k~La~~f~si~~l~~~~~~~~~~~~~~~e~L~~I~GiG~~~A~si~~ff 616 (731)
T Consensus 96 k~l~~~~~~~~~~~~~~---------~R~~LL~iKGIG~ETaDsILlYa 135 (215)
T COG2231 96 KNLAKFFINLESFKSEV---------LREELLSIKGIGKETADSILLYA 135 (215)
T ss_pred HHHHHHHHHHHCCCHHH---------HHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 99999864231115188---------99998726886622399999998