HHsearch alignment for GI: 254781172 and conserved domain: PRK00254

Probab=94.57  E-value=0.02  Score=37.85  Aligned_cols=66  Identities=18%  Similarity=0.350  Sum_probs=37.4

Q ss_pred             CCCCCHHHHHCCCCCCHHHHHHHHHH-HCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHH
Q ss_conf             25117787613888678999999999-66979999999999733877654322468821686699972588998789999
Q gi|254781172|r  590 HNNDDWLSLIRVPLVGDIIAQAIVEF-YQNPRNICAVEALLKEVSPSIGRHEKNVSSEIENKKLVFTGTLQKIQRHKAQE  668 (731)
Q Consensus       590 ~~~~~~e~L~~I~GiG~~~A~si~~f-f~~~~n~~~i~~L~~~~~~~~~~~~~~~~~~l~gk~vV~TGtl~~~~R~e~~~  668 (731)
T Consensus       638 Gv~~ELl~L~~I~gvgr~RAR~Ly~aGi~s~~------~ia~A-----------~p~----~l~~i~g----~g~~~a~~  692 (717)
T PRK00254        638 GIREELIPLMELPMIGRKRARALYNAGFRDLE------DIMNA-----------KPS----ELLAVEG----IGAKIVEG  692 (717)
T ss_pred             CCCHHHHHHCCCCCCCHHHHHHHHHCCCCCHH------HHHCC-----------CHH----HEECCCC----CCHHHHHH
T ss_conf             99765683564899898999999986999999------99659-----------999----9030237----27899999


Q ss_pred             HHHHCCCEEEEE
Q ss_conf             999829849981
Q gi|254781172|r  669 YVTQLGAVVSAI  680 (731)
Q Consensus       669 ~ie~~Ggkv~sS  680 (731)
T Consensus       693 i~~~~~~~~~~~  704 (717)
T PRK00254        693 IFKHLGKEVKIN  704 (717)
T ss_pred             HHHHHCCEEEHH
T ss_conf             999838644300