HHsearch alignment for GI: 254781172 and conserved domain: pfam03119

>pfam03119 DNA_ligase_ZBD NAD-dependent DNA ligase C4 zinc finger domain. DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilising either ATP or NAD(+) as a cofactor. This family is a small zinc binding motif that is presumably DNA binding. IT is found only in NAD dependent DNA ligases.

Probab=96.62  E-value=0.00092  Score=48.27  Aligned_cols=27  Identities=44%  Similarity=1.015  Sum_probs=23.9

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHH
Q ss_conf             3265775010337865445210100354344114
Q gi|254781172|r  433 FCPICQSRVVRDLNPKTGKLVAAHRCTGGLACSA  466 (731)
Q Consensus       433 ~CP~Cgs~l~~~~~~~~~~~~~~~rC~n~~~Cpa  466 (731)
T Consensus         1 ~CP~C~s~l~r~~~e------v~~rC~n~-~CpA   27 (27)
T pfam03119         1 HCPVCGSPLVREEGE------VDIRCTNG-SCPA   27 (27)
T ss_pred             CCCCCCCEEECCCCC------EEEECCCC-CCCC
T ss_conf             988898974856897------86888898-8879